RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TACC1O75410 805 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 KRT79Q5XKE5 535 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 HS2ST1Q7LGA3 356 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 ANKRD24Q8TF21 1146 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 CALCOCO1Q9P1Z2 691 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 STMN2Q93045 179 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 BAG1Q99933 345 aaPredicted RBP13.97□□□□□ -0.17
CHD3-203ENST00000380358 KIF9Q9HAQ2 790 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 BRD4O60885 1362 aaPredicted RBP13.97□□□□□ -0.17
CHD3-203ENST00000380358 KANK3Q6NY19 840 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 SSH1Q8WYL5 1049 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 ESYT2A0FGR8 921 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 ZNF569Q5MCW4 686 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 NUF2Q9BZD4 464 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 DBF4Q9UBU7 674 aaPredicted RBP13.97□□□□□ -0.17
CHD3-203ENST00000380358 CIB2O75838 187 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 LONRF3Q496Y0 759 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 DDX27Q96GQ7 796 aaKnown RBP13.96□□□□□ -0.17
CHD3-203ENST00000380358 RIOK1Q9BRS2 568 aaKnown RBP13.96□□□□□ -0.17
CHD3-203ENST00000380358 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.96□□□□□ -0.171e-5■■■■□ 19.8
CHD3-203ENST00000380358 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 PSMA7O14818 248 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 CASP2P42575 452 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 KIF22Q14807 665 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 ARHGEF2Q92974 986 aaKnown RBP13.96□□□□□ -0.17
CHD3-203ENST00000380358 POTEB2H3BUK9 544 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 ZNF174Q15697 407 aa13.96□□□□□ -0.17
CHD3-203ENST00000380358 NOC2LQ9Y3T9 749 aaKnown RBP13.96□□□□□ -0.17
CHD3-203ENST00000380358 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 C20orf194Q5TEA3 1177 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.18
CHD3-203ENST00000380358 CTAGE9A4FU28 777 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 GSDMDP57764 484 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 CLUL1Q15846 466 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 SEL1L2Q5TEA6 688 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 PSMB7Q99436 277 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 CHPF2Q9P2E5 772 aa13.96□□□□□ -0.18
CHD3-203ENST00000380358 LCA5Q86VQ0 697 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 KRT23Q9C075 422 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 PTPROQ16827 1216 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 INTS8Q75QN2 995 aaKnown RBP13.95□□□□□ -0.18
CHD3-203ENST00000380358 TNPO1Q92973 898 aaKnown RBP13.95□□□□□ -0.18
CHD3-203ENST00000380358 DNAJC25Q9H1X3 360 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 PA2G4Q9UQ80 394 aaKnown RBP13.95□□□□□ -0.18
CHD3-203ENST00000380358 STRN3Q13033 797 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 NXNQ6DKJ4 435 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 POMGNT1Q8WZA1 660 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 CCDC42Q96M95 316 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 STIM2Q9P246 746 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
CHD3-203ENST00000380358 OATP04181 439 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 Q3C1V9 767 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 NSMCE1Q8WV22 266 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 BACH2Q9BYV9 841 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 CTNND2Q9UQB3 1225 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 M0QZ92 97 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 MGARPQ8TDB4 240 aa13.95□□□□□ -0.18
CHD3-203ENST00000380358 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
CHD3-203ENST00000380358 DTNBO60941 627 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 KRT2P35908 639 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 SYT1P21579 422 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 LRMPQ12912 555 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 MYO1AQ9UBC5 1043 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 ITM2BQ9Y287 266 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 SMCR8Q8TEV9 937 aaPredicted RBP13.94□□□□□ -0.18
CHD3-203ENST00000380358 OLA1Q9NTK5 396 aaKnown RBP13.94□□□□□ -0.18
CHD3-203ENST00000380358 NAP1L4Q99733 375 aaKnown RBP13.94□□□□□ -0.18
CHD3-203ENST00000380358 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 VWA3AA6NCI4 1184 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 NCAPH2Q6IBW4 605 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 RMDN2Q96LZ7 410 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
CHD3-203ENST00000380358 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
CHD3-203ENST00000380358 ECHDC1Q9NTX5 307 aa13.94□□□□□ -0.18
CHD3-203ENST00000380358 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
CHD3-203ENST00000380358 CAPN12Q6ZSI9 719 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 CCDC61Q9Y6R9 512 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
CHD3-203ENST00000380358 ST7Q9NRC1 585 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 PRPHP41219 470 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
CHD3-203ENST00000380358 APOBRQ0VD83 1088 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 SLC12A1Q13621 1099 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 PRR16Q569H4 304 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 UTP14CQ5TAP6 766 aaKnown RBP13.93□□□□□ -0.18
CHD3-203ENST00000380358 TRAF5O00463 557 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 GNPATO15228 680 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
CHD3-203ENST00000380358 ALDH3A1P30838 453 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 CD19P15391 556 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 NEDD9Q14511 834 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 SCYL2Q6P3W7 929 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms