RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PSMD1Q99460 953 aa29.36■■■□□ 2.29
ECHDC3-201ENST00000379215 PALD1Q9ULE6 856 aa29.36■■■□□ 2.29
ECHDC3-201ENST00000379215 GSTO1P78417 241 aa29.35■■■□□ 2.29
ECHDC3-201ENST00000379215 DZIP1Q86YF9 867 aaKnown RBP29.35■■■□□ 2.29
ECHDC3-201ENST00000379215 NSUN4Q96CB9 384 aaKnown RBP29.35■■■□□ 2.29
ECHDC3-201ENST00000379215 VPS33BQ9H267 617 aa29.35■■■□□ 2.29
ECHDC3-201ENST00000379215 SUGT1Q9Y2Z0 365 aa29.35■■■□□ 2.29
ECHDC3-201ENST00000379215 ST18O60284 1047 aa29.34■■■□□ 2.29
ECHDC3-201ENST00000379215 PPP1R1BQ9UD71 204 aaPredicted RBP29.34■■■□□ 2.29
ECHDC3-201ENST00000379215 MYO5AQ9Y4I1 1855 aaKnown RBP29.34■■■□□ 2.29
ECHDC3-201ENST00000379215 SNX14Q9Y5W7 946 aa29.34■■■□□ 2.29
ECHDC3-201ENST00000379215 RPAP1Q9BWH6 1393 aaPredicted RBP29.34■■■□□ 2.29
ECHDC3-201ENST00000379215 KRT32Q14532 448 aa29.34■■■□□ 2.29
ECHDC3-201ENST00000379215 HSCBQ8IWL3 235 aa29.34■■■□□ 2.29
ECHDC3-201ENST00000379215 SLC27A2O14975 620 aa29.33■■■□□ 2.29
ECHDC3-201ENST00000379215 MECOMQ03112 1051 aa29.33■■■□□ 2.29
ECHDC3-201ENST00000379215 KIAA2012Q0VF49 1180 aa29.33■■■□□ 2.29
ECHDC3-201ENST00000379215 TSGA10IPQ3SY00 556 aa29.33■■■□□ 2.29
ECHDC3-201ENST00000379215 STRBPQ96SI9 672 aaKnown RBP29.33■■■□□ 2.29
ECHDC3-201ENST00000379215 MBD4O95243 580 aa29.32■■■□□ 2.28
ECHDC3-201ENST00000379215 PRDX5P30044 214 aa29.32■■■□□ 2.28
ECHDC3-201ENST00000379215 ILDR2Q71H61 639 aa29.32■■■□□ 2.28
ECHDC3-201ENST00000379215 PSMA5P28066 241 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 VPS53Q5VIR6 699 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 CERS3Q8IU89 383 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 SLF2Q8IX21 1173 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 TM6SF1Q9BZW5 370 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 ZMYM6O95789 1325 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 MAGEB6P1A0A0J9YX57 407 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 LDHCP07864 332 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 MFSD14BQ5SR56 506 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 JAG2Q9Y219 1238 aa29.31■■■□□ 2.28
ECHDC3-201ENST00000379215 RASEFQ8IZ41 740 aa29.3■■■□□ 2.28
ECHDC3-201ENST00000379215 KLHL34Q8N239 644 aa29.3■■■□□ 2.28
ECHDC3-201ENST00000379215 CCDC88AQ3V6T2 1871 aa29.29■■■□□ 2.28
ECHDC3-201ENST00000379215 GTF2IP78347 998 aa29.29■■■□□ 2.28
ECHDC3-201ENST00000379215 NACAP1Q9BZK3 213 aa29.29■■■□□ 2.28
ECHDC3-201ENST00000379215 FKBP1AP62942 108 aaKnown RBP29.28■■■□□ 2.28
ECHDC3-201ENST00000379215 ALX1Q15699 326 aa29.28■■■□□ 2.28
ECHDC3-201ENST00000379215 DOK7Q18PE1 504 aa29.28■■■□□ 2.28
ECHDC3-201ENST00000379215 PATL2C9JE40 543 aaKnown RBP29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 PPIP5K2O43314 1243 aa29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 MCM2P49736 904 aa29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 IMMTQ16891 758 aaKnown RBP29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 TTLL5Q6EMB2 1281 aa29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 TBC1D2Q9BYX2 928 aa29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 ECE2O60344 883 aa29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 MIGA1Q8NAN2 632 aa29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 NOL10Q9BSC4 688 aaKnown RBP29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 ARMT1Q9H993 441 aa29.27■■■□□ 2.28
ECHDC3-201ENST00000379215 BRCA1P38398 1863 aaKnown RBP29.26■■■□□ 2.28
ECHDC3-201ENST00000379215 APPP05067 770 aa29.26■■■□□ 2.27
ECHDC3-201ENST00000379215 NEK4P51957 841 aa29.26■■■□□ 2.27
ECHDC3-201ENST00000379215 ADGRA1Q86SQ6 560 aa29.26■■■□□ 2.27
ECHDC3-201ENST00000379215 LCORLQ8N3X6 602 aa29.26■■■□□ 2.27
ECHDC3-201ENST00000379215 ZNF384Q8TF68 577 aa29.26■■■□□ 2.27
ECHDC3-201ENST00000379215 RIOK1Q9BRS2 568 aaKnown RBP29.26■■■□□ 2.27
ECHDC3-201ENST00000379215 FOXP2O15409 715 aa29.25■■■□□ 2.27
ECHDC3-201ENST00000379215 FGAP02671 866 aa29.25■■■□□ 2.27
ECHDC3-201ENST00000379215 AOC3Q16853 763 aa29.25■■■□□ 2.27
ECHDC3-201ENST00000379215 STRIP1Q5VSL9 837 aa29.25■■■□□ 2.27
ECHDC3-201ENST00000379215 DBNDD1Q9H9R9 158 aa29.25■■■□□ 2.27
ECHDC3-201ENST00000379215 BAG3O95817 575 aa29.24■■■□□ 2.27
ECHDC3-201ENST00000379215 CYP21A2P08686 494 aa29.24■■■□□ 2.27
ECHDC3-201ENST00000379215 JAKMIP1Q96N16 626 aaKnown RBP29.24■■■□□ 2.27
ECHDC3-201ENST00000379215 SLC4A4Q9Y6R1 1079 aa29.24■■■□□ 2.27
ECHDC3-201ENST00000379215 FBXW7Q969H0 707 aa29.23■■■□□ 2.27
ECHDC3-201ENST00000379215 CYP46A1Q9Y6A2 500 aa29.23■■■□□ 2.27
ECHDC3-201ENST00000379215 GIMAP6Q6P9H5 292 aa29.23■■■□□ 2.27
ECHDC3-201ENST00000379215 NAPBQ9H115 298 aa29.23■■■□□ 2.27
ECHDC3-201ENST00000379215 ZSWIM6Q9HCJ5 1215 aa29.23■■■□□ 2.27
ECHDC3-201ENST00000379215 MROH7-TTC4A0A0A0MT08 1334 aa29.23■■■□□ 2.27
ECHDC3-201ENST00000379215 HMGB1P09429 215 aaKnown RBP29.22■■■□□ 2.27
ECHDC3-201ENST00000379215 CASTP20810 708 aaKnown RBP29.22■■■□□ 2.27
ECHDC3-201ENST00000379215 FAM163AQ96GL9 167 aaPredicted RBP29.22■■■□□ 2.27
ECHDC3-201ENST00000379215 CRNKL1Q9BZJ0 848 aaKnown RBP29.22■■■□□ 2.27
ECHDC3-201ENST00000379215 USP17L3A6NCW0 530 aa29.21■■■□□ 2.27
ECHDC3-201ENST00000379215 USP17L4A6NCW7 530 aa29.21■■■□□ 2.27
ECHDC3-201ENST00000379215 K7ELQ4 463 aaPredicted RBP29.21■■■□□ 2.27
ECHDC3-201ENST00000379215 ZNF213O14771 459 aa29.21■■■□□ 2.27
ECHDC3-201ENST00000379215 USP17L1Q7RTZ2 530 aa29.21■■■□□ 2.27
ECHDC3-201ENST00000379215 IFNL3Q8IZI9 196 aa29.21■■■□□ 2.27
ECHDC3-201ENST00000379215 TAOK3Q9H2K8 898 aa29.21■■■□□ 2.27
ECHDC3-201ENST00000379215 PPP4CP60510 307 aa29.2■■■□□ 2.27
ECHDC3-201ENST00000379215 BLOC1S2Q6QNY1 142 aa29.2■■■□□ 2.27
ECHDC3-201ENST00000379215 LARGE2Q8N3Y3 721 aa29.2■■■□□ 2.27
ECHDC3-201ENST00000379215 GSG1L2A8MUP6 293 aa29.2■■■□□ 2.26
ECHDC3-201ENST00000379215 PLCG2P16885 1265 aa29.2■■■□□ 2.26
ECHDC3-201ENST00000379215 RUFY3Q7L099 469 aa29.2■■■□□ 2.26
ECHDC3-201ENST00000379215 UPF3BQ9BZI7 483 aaKnown RBP29.2■■■□□ 2.26
ECHDC3-201ENST00000379215 AATFQ9NY61 560 aaKnown RBP eCLIP29.2■■■□□ 2.26
ECHDC3-201ENST00000379215 BCS1LQ9Y276 419 aa29.2■■■□□ 2.26
ECHDC3-201ENST00000379215 TDO2P48775 406 aa29.19■■■□□ 2.26
ECHDC3-201ENST00000379215 ADCK5Q3MIX3 580 aa29.19■■■□□ 2.26
ECHDC3-201ENST00000379215 NEK1Q96PY6 1258 aa29.19■■■□□ 2.26
ECHDC3-201ENST00000379215 GAKO14976 1311 aa29.18■■■□□ 2.26
ECHDC3-201ENST00000379215 LTBP3Q9NS15 1303 aa29.18■■■□□ 2.26
ECHDC3-201ENST00000379215 GRIK5Q16478 980 aa29.18■■■□□ 2.26
ECHDC3-201ENST00000379215 IARSP41252 1262 aaKnown RBP29.17■■■□□ 2.26
ECHDC3-201ENST00000379215 DACT2Q5SW24 774 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms