RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ZNF512BQ96KM6 892 aaPredicted RBP14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 ARAP2Q8WZ64 1704 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 IDH1O75874 414 aaKnown RBP14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 MX1P20591 662 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 FKBP1AP62942 108 aaKnown RBP14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 DLGAP5Q15398 846 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 CFAP100Q494V2 611 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 DZIP1Q86YF9 867 aaKnown RBP14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 WNT10BO00744 389 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 TOMM70O94826 608 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 ATP5JP18859 108 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 ZGPATQ8N5A5 531 aaKnown RBP14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 GPATCH3Q96I76 525 aa14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 PRMT6Q96LA8 375 aaPredicted RBP14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 PIH1D3Q9NQM4 214 aaKnown RBP14.29□□□□□ -0.12
DEPDC4-202ENST00000378244 CRKP46108 304 aa14.28□□□□□ -0.12
DEPDC4-202ENST00000378244 MECOMQ03112 1051 aa14.28□□□□□ -0.12
DEPDC4-202ENST00000378244 DLK2Q6UY11 383 aa14.28□□□□□ -0.12
DEPDC4-202ENST00000378244 SKAP1Q86WV1 359 aa14.28□□□□□ -0.12
DEPDC4-202ENST00000378244 AOX1Q06278 1338 aa14.28□□□□□ -0.12
DEPDC4-202ENST00000378244 CLRN2A0PK11 232 aa14.27□□□□□ -0.12
DEPDC4-202ENST00000378244 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.12
DEPDC4-202ENST00000378244 TEKT1Q969V4 418 aa14.27□□□□□ -0.12
DEPDC4-202ENST00000378244 GGA3Q9NZ52 723 aa14.27□□□□□ -0.12
DEPDC4-202ENST00000378244 SALL1Q9NSC2 1324 aa14.27□□□□□ -0.12
DEPDC4-202ENST00000378244 SPTY2D1Q68D10 685 aaPredicted RBP14.27□□□□□ -0.13
DEPDC4-202ENST00000378244 PSME4Q14997 1843 aa14.27□□□□□ -0.13
DEPDC4-202ENST00000378244 SCN4AP35499 1836 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 PDS5AQ29RF7 1337 aaKnown RBP14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 LDHDQ86WU2 507 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 TDRD3Q9H7E2 651 aaKnown RBP14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 PAG1Q9NWQ8 432 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 MYH13Q9UKX3 1938 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 ZNF646O15015 1829 aaPredicted RBP14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 CEP350Q5VT06 3117 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 PDE1AP54750 535 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 HAUS7Q99871 368 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 VEZTQ9HBM0 779 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 SUGT1Q9Y2Z0 365 aa14.26□□□□□ -0.13
DEPDC4-202ENST00000378244 CACNB3P54284 484 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 CNTROBQ8N137 903 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 PI4K2BQ8TCG2 481 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 NSUN4Q96CB9 384 aaKnown RBP14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 GLIS2Q9BZE0 524 aaPredicted RBP14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 MAST3O60307 1309 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 SALL3Q9BXA9 1300 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 ERC2O15083 957 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 CHGBP05060 677 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 SLFNL1Q499Z3 407 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 CENPQQ7L2Z9 268 aaPredicted RBP14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 DCPSQ96C86 337 aaKnown RBP14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 DAGLAQ9Y4D2 1042 aa14.25□□□□□ -0.13
DEPDC4-202ENST00000378244 TTC41PQ6P2S7 1318 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 TRAF5O00463 557 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 MYO1BO43795 1136 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 PDE4AP27815 886 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 PRAMEF18Q5VWM3 479 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 PLEKHM2Q8IWE5 1019 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 MAGEB6Q8N7X4 407 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 GLRX3O76003 335 aaKnown RBP14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 MAP3K12Q12852 859 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 SLC9C2Q5TAH2 1124 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 APOBEC3HQ6NTF7 200 aaKnown RBP14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 KRT26Q7Z3Y9 468 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 SMC1BQ8NDV3 1235 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 PPP4R2Q9NY27 417 aa14.24□□□□□ -0.13
DEPDC4-202ENST00000378244 AKAP11Q9UKA4 1901 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 PCNTO95613 3336 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 ADM5C9JUS6 153 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 TTF1Q15361 905 aaPredicted RBP14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 HHIPL2Q6UWX4 724 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 ADGRA1Q86SQ6 560 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 ZDHHC15Q96MV8 337 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 CYP7A1P22680 504 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 HDLBPQ00341 1268 aaKnown RBP14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 SULF1Q8IWU6 871 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 MIGA1Q8NAN2 632 aa14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 RBM46Q8TBY0 533 aaKnown RBP14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 ZBED3Q96IU2 234 aaPredicted RBP14.23□□□□□ -0.13
DEPDC4-202ENST00000378244 ADAMTSL1Q8N6G6 1762 aa14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 TCP10L2B9ZVM9 353 aa14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 ZBTB22O15209 634 aa14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 BTDP43251 543 aa14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 MTMR14Q8NCE2 650 aa14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 ZNF408Q9H9D4 720 aa14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 AATFQ9NY61 560 aaKnown RBP eCLIP14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 STAP2Q9UGK3 403 aa14.22□□□□□ -0.13
DEPDC4-202ENST00000378244 TRIM6-TRIM34B2RNG4 842 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms