RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
BEST1-201ENST00000378043 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 POLR3EQ9NVU0 708 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 ANKRD36CQ5JPF3 1778 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 MYSM1Q5VVJ2 828 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 TBC1D10CQ8IV04 446 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 PIH1D3Q9NQM4 214 aaKnown RBP12.75□□□□□ -0.37
BEST1-201ENST00000378043 ANO10Q9NW15 660 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 WDR19Q8NEZ3 1342 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 DHX16O60231 1041 aaKnown RBP12.75□□□□□ -0.37
BEST1-201ENST00000378043 STARD3NLO95772 234 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 CTSWP56202 376 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 SLC9C2Q5TAH2 1124 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
BEST1-201ENST00000378043 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 ZNF512BQ96KM6 892 aaPredicted RBP12.75□□□□□ -0.37
BEST1-201ENST00000378043 ARID3AQ99856 593 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 ATRNO75882 1429 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 YEATS4O95619 227 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 KIF23Q02241 960 aaPredicted RBP12.74□□□□□ -0.37
BEST1-201ENST00000378043 CYB5R4Q7L1T6 521 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 C16orf45Q96MC5 204 aaPredicted RBP12.74□□□□□ -0.37
BEST1-201ENST00000378043 AIFM3Q96NN9 605 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 CTIFO43310 598 aaKnown RBP12.74□□□□□ -0.37
BEST1-201ENST00000378043 STK38Q15208 465 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 AXDND1Q5T1B0 1012 aaPredicted RBP12.74□□□□□ -0.37
BEST1-201ENST00000378043 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.37
BEST1-201ENST00000378043 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 LRP6O75581 1613 aa12.74□□□□□ -0.37
BEST1-201ENST00000378043 BECN2A8MW95 431 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 CPLX1O14810 134 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 SPTLC2O15270 562 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 PDE8BO95263 885 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
BEST1-201ENST00000378043 PHKA1P46020 1223 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 AOPEPQ8N6M6 819 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 KCNG4Q8TDN1 519 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 CNNM1Q9NRU3 951 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 ECM29Q5VYK3 1845 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 ANKRD18BA2A2Z9 1011 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 IRS4O14654 1257 aaPredicted RBP12.73□□□□□ -0.37
BEST1-201ENST00000378043 CHAF1AQ13111 956 aaPredicted RBP12.73□□□□□ -0.37
BEST1-201ENST00000378043 DPCR1Q3MIW9 517 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
BEST1-201ENST00000378043 ANGEL1Q9UNK9 670 aaKnown RBP12.73□□□□□ -0.37
BEST1-201ENST00000378043 TCRBV5S4A2TA0A5A2 114 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 IDH1O75874 414 aaKnown RBP12.72□□□□□ -0.37
BEST1-201ENST00000378043 RXRAP19793 462 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 UBE3CQ15386 1083 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 CCDC102BQ68D86 513 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 WWC3Q9ULE0 1092 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 WDHD1O75717 1129 aaPredicted RBP12.72□□□□□ -0.37
BEST1-201ENST00000378043 CDC27P30260 824 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 RBM6P78332 1123 aaKnown RBP12.72□□□□□ -0.37
BEST1-201ENST00000378043 SF3A1Q15459 793 aaKnown RBP12.72□□□□□ -0.37
BEST1-201ENST00000378043 ANO1Q5XXA6 986 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 NBPF11Q86T75 865 aa12.72□□□□□ -0.37
BEST1-201ENST00000378043 ZMYM6O95789 1325 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 SLIT2O94813 1529 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 USP27XA6NNY8 438 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
BEST1-201ENST00000378043 ZNF202O95125 648 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 PDE6AP16499 860 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 ARID4AP29374 1257 aaPredicted RBP12.71□□□□□ -0.37
BEST1-201ENST00000378043 INCENPQ9NQS7 918 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.37
BEST1-201ENST00000378043 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 BCL9O00512 1426 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 CHD4Q14839 1912 aa12.71□□□□□ -0.37
BEST1-201ENST00000378043 B4E1Z4 1266 aa12.71□□□□□ -0.38
BEST1-201ENST00000378043 TNNT1P13805 278 aa12.71□□□□□ -0.38
BEST1-201ENST00000378043 CCZ1BP86790 482 aa12.71□□□□□ -0.38
BEST1-201ENST00000378043 CCZ1P86791 482 aaPredicted RBP12.71□□□□□ -0.38
BEST1-201ENST00000378043 TTF1Q15361 905 aaPredicted RBP12.71□□□□□ -0.38
BEST1-201ENST00000378043 APOA5Q6Q788 366 aa12.71□□□□□ -0.38
BEST1-201ENST00000378043 TRDNQ13061 729 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 FILIP1Q7Z7B0 1213 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
BEST1-201ENST00000378043 IGDCC4Q8TDY8 1250 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 ANKRD7Q92527 254 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 STRBPQ96SI9 672 aaKnown RBP12.7□□□□□ -0.38
BEST1-201ENST00000378043 CCDC94Q9BW85 323 aaPredicted RBP12.7□□□□□ -0.38
BEST1-201ENST00000378043 STRCQ7RTU9 1775 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 SNAP23O00161 211 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 PDE8AO60658 829 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 APPP05067 770 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 PFKFB1P16118 471 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 FGFR2P21802 821 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 CMA1P23946 247 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 METAP2P50579 478 aaKnown RBP eCLIP12.7□□□□□ -0.38
BEST1-201ENST00000378043 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms