RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 ASAP1Q9ULH1 1129 aa23.68■■□□□ 1.38
CLN5-201ENST00000377453 SNAP23O00161 211 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 PFKFB1P16118 471 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 HLFQ16534 295 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 METTL24Q5JXM2 366 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 NCOA7Q8NI08 942 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 ZNF215Q9UL58 517 aaPredicted RBP23.67■■□□□ 1.38
CLN5-201ENST00000377453 KCPQ6ZWJ8 1503 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 KIF23Q02241 960 aaPredicted RBP23.67■■□□□ 1.38
CLN5-201ENST00000377453 PTPN14Q15678 1187 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 STK11IPQ8N1F8 1099 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 GREM2Q9H772 168 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 CTNNA3Q9UI47 895 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 ABCC6O95255 1503 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 PKD1L3Q7Z443 1732 aa23.67■■□□□ 1.38
CLN5-201ENST00000377453 IDH1O75874 414 aaKnown RBP23.66■■□□□ 1.38
CLN5-201ENST00000377453 LMOD1P29536 600 aaPredicted RBP23.66■■□□□ 1.38
CLN5-201ENST00000377453 EVCP57679 992 aa23.66■■□□□ 1.38
CLN5-201ENST00000377453 RBM6P78332 1123 aaKnown RBP23.66■■□□□ 1.38
CLN5-201ENST00000377453 PIH1D3Q9NQM4 214 aaKnown RBP23.66■■□□□ 1.38
CLN5-201ENST00000377453 NUP188Q5SRE5 1749 aa23.66■■□□□ 1.38
CLN5-201ENST00000377453 ATP1A3P13637 1013 aa23.66■■□□□ 1.38
CLN5-201ENST00000377453 GOLGA8FQ08AF8 430 aa23.66■■□□□ 1.38
CLN5-201ENST00000377453 GOLGA8DPQ0D2H9 430 aa23.66■■□□□ 1.38
CLN5-201ENST00000377453 IFIT5Q13325 482 aaKnown RBP23.66■■□□□ 1.38
CLN5-201ENST00000377453 AXDND1Q5T1B0 1012 aaPredicted RBP23.66■■□□□ 1.38
CLN5-201ENST00000377453 MICU3Q86XE3 530 aa23.66■■□□□ 1.38
CLN5-201ENST00000377453 HELBQ8NG08 1087 aaPredicted RBP23.66■■□□□ 1.38
CLN5-201ENST00000377453 LAMB4A4D0S4 1761 aa23.66■■□□□ 1.38
CLN5-201ENST00000377453 SLC3A2P08195 630 aaKnown RBP23.65■■□□□ 1.38
CLN5-201ENST00000377453 CDC27P30260 824 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 SLC9C2Q5TAH2 1124 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 ANO1Q5XXA6 986 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 ARMCX5Q6P1M9 558 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 SYNE3Q6ZMZ3 975 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 CCAR2Q8N163 923 aaKnown RBP23.65■■□□□ 1.38
CLN5-201ENST00000377453 CLIC6Q96NY7 704 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 B4E1Z4 1266 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 ZRSR1Q15695 479 aaKnown RBP23.65■■□□□ 1.38
CLN5-201ENST00000377453 ATL3Q6DD88 541 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 NYAP1Q6ZVC0 841 aa23.65■■□□□ 1.38
CLN5-201ENST00000377453 CADPS2Q86UW7 1296 aa23.64■■□□□ 1.38
CLN5-201ENST00000377453 WDR17Q8IZU2 1322 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 A0A1W2PQ27 194 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 A0A1W2PQ64 194 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 A0A1W2PQD8 194 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 HSP90AA4PQ58FG1 418 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 LDHAL6AQ6ZMR3 332 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 ALG1Q9BT22 464 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 POLR3EQ9NVU0 708 aa23.64■■□□□ 1.37
CLN5-201ENST00000377453 SPECC1Q5M775 1068 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 LRRN4CLQ8ND94 238 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 KCNG4Q8TDN1 519 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 AKAP2Q9Y2D5 859 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 PAXBP1Q9Y5B6 917 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 ERVV-2B6SEH9 535 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 ITGA6P23229 1130 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 NAT10Q9H0A0 1025 aaKnown RBP23.63■■□□□ 1.37
CLN5-201ENST00000377453 WWC3Q9ULE0 1092 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 NCAPHQ15003 741 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.63■■□□□ 1.37
CLN5-201ENST00000377453 ATG3Q9NT62 314 aa23.63■■□□□ 1.37
CLN5-201ENST00000377453 RIC1Q4ADV7 1423 aa23.62■■□□□ 1.37
CLN5-201ENST00000377453 E4F1Q66K89 784 aaPredicted RBP23.62■■□□□ 1.37
CLN5-201ENST00000377453 DPF2Q92785 391 aa23.62■■□□□ 1.37
CLN5-201ENST00000377453 YEATS4O95619 227 aa23.62■■□□□ 1.37
CLN5-201ENST00000377453 PHKA1P46020 1223 aa23.62■■□□□ 1.37
CLN5-201ENST00000377453 PNOCQ13519 176 aa23.62■■□□□ 1.37
CLN5-201ENST00000377453 VPS37DQ86XT2 251 aa23.62■■□□□ 1.37
CLN5-201ENST00000377453 METAP2P50579 478 aaKnown RBP eCLIP23.61■■□□□ 1.37
CLN5-201ENST00000377453 BRINP3Q76B58 766 aa23.61■■□□□ 1.37
CLN5-201ENST00000377453 CNNM1Q9NRU3 951 aa23.61■■□□□ 1.37
CLN5-201ENST00000377453 ZFYP08048 801 aaPredicted RBP23.61■■□□□ 1.37
CLN5-201ENST00000377453 IL2RBP14784 551 aa23.61■■□□□ 1.37
CLN5-201ENST00000377453 DMTNQ08495 405 aa23.61■■□□□ 1.37
CLN5-201ENST00000377453 KRT40Q6A162 431 aa23.61■■□□□ 1.37
CLN5-201ENST00000377453 ELF2Q15723 593 aa23.6■■□□□ 1.37
CLN5-201ENST00000377453 SHC4Q6S5L8 630 aa23.6■■□□□ 1.37
CLN5-201ENST00000377453 RIPOR2Q9Y4F9 1068 aa23.6■■□□□ 1.37
CLN5-201ENST00000377453 ZNF532Q9HCE3 1301 aa23.6■■□□□ 1.37
CLN5-201ENST00000377453 DHX16O60231 1041 aaKnown RBP23.6■■□□□ 1.37
CLN5-201ENST00000377453 ADD2P35612 726 aa23.6■■□□□ 1.37
CLN5-201ENST00000377453 TACC3Q9Y6A5 838 aa23.6■■□□□ 1.37
CLN5-201ENST00000377453 FOXN1O15353 648 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 PCCAP05165 728 aaPredicted RBP23.59■■□□□ 1.37
CLN5-201ENST00000377453 NLRP12P59046 1061 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 FBXL16Q8N461 479 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 CCDC82Q8N4S0 544 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 HSD3B7Q9H2F3 369 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 TMOD3Q9NYL9 352 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 RANBP6O60518 1105 aaKnown RBP23.59■■□□□ 1.37
CLN5-201ENST00000377453 CTDSPL2Q05D32 466 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 GNL2Q13823 731 aaKnown RBP23.59■■□□□ 1.37
CLN5-201ENST00000377453 KIF6Q6ZMV9 814 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 BRAPQ7Z569 592 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 ZBTB38Q8NAP3 1195 aaPredicted RBP23.59■■□□□ 1.37
CLN5-201ENST00000377453 TTLL11Q8NHH1 800 aa23.59■■□□□ 1.37
CLN5-201ENST00000377453 ANGEL1Q9UNK9 670 aaKnown RBP23.59■■□□□ 1.37
CLN5-201ENST00000377453 NEMFO60524 1076 aa23.58■■□□□ 1.37
CLN5-201ENST00000377453 CSF1RP07333 972 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms