RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 CASZ1Q86V15 1759 aa16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 MCTP1Q6DN14 999 aa16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 COL23A1Q86Y22 540 aaPredicted RBP16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 NACAP1Q9BZK3 213 aa16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 SALL1Q9NSC2 1324 aa16.46■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 APPP05067 770 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 CYP7A1P22680 504 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 KLRK1P26718 216 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 HAND2P61296 217 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 FGD1P98174 961 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 BRIP1Q9BX63 1249 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RGS17Q9UGC6 210 aaPredicted RBP16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ATP2B4P23634 1241 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 TRDNQ13061 729 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 GIMAP6Q6P9H5 292 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 TDRD7Q8NHU6 1098 aaKnown RBP16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ARMT1Q9H993 441 aa16.45■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 TAF1P21675 1872 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 F13A1P00488 732 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 PDIA3P30101 505 aaKnown RBP16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 SCRN1Q12765 414 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 LARP1BQ659C4 914 aaKnown RBP16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 LCORLQ8N3X6 602 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 TMEM87AQ8NBN3 555 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 NSUN4Q96CB9 384 aaKnown RBP16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 MTA3Q9BTC8 594 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 NAPBQ9H115 298 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RAI14Q9P0K7 980 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ANKIB1Q9P2G1 1089 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ABCF2Q9UG63 623 aa16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 PRC1O43663 620 aa16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ANTXR2P58335 489 aa16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 SPTY2D1Q68D10 685 aaPredicted RBP16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 NAA16Q6N069 864 aaPredicted RBP16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 TXNRD3Q86VQ6 643 aa16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 TBC1D10CQ8IV04 446 aa16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 LRRC2Q9BYS8 371 aa16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 MAGEB6P1A0A0J9YX57 407 aa16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 APOBRQ0VD83 1088 aa16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 CNNM2Q9H8M5 875 aa16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 SLC4A4Q9Y6R1 1079 aa16.42■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ZNF804AQ7Z570 1209 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RGS22Q8NE09 1264 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 DDX49Q9Y6V7 483 aaKnown RBP16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 PRPF40AO75400 957 aaKnown RBP16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 GPSM2P81274 684 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 STK3Q13188 491 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 AKNAD1Q5T1N1 836 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 NSUN7Q8NE18 718 aaKnown RBP16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 KRT23Q9C075 422 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 CACNA1SQ13698 1873 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 PRKAB2O43741 272 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 CTDNEP1O95476 244 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 PCP11498 1178 aaKnown RBP16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 IL1R1P14778 569 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 MECOMQ03112 1051 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 SGMS1Q86VZ5 419 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 MIGA1Q8NAN2 632 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.22
NIPSNAP3A-201ENST00000374767 FSD2A1L4K1 749 aa16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 MBD3O95983 291 aa16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 SRGNP10124 158 aa16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 NPR1P16066 1061 aa16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 LIFRP42702 1097 aa16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 CHST3Q7LGC8 479 aa16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 IGDCC4Q8TDY8 1250 aa16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 LAMA4Q16363 1823 aa16.38■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 FGRP09769 529 aa16.38■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 PDE6BP35913 854 aa16.38■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 TDO2P48775 406 aa16.38■□□□□ 0.21
NIPSNAP3A-201ENST00000374767 MFSD6Q6ZSS7 791 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms