RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 ADCY5O95622 1261 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 ADORA1P30542 326 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
CHD6-202ENST00000373222 BRINP3Q76B58 766 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 RAB11FIP4Q86YS3 637 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 PLBD2Q8NHP8 589 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 BRF1Q92994 677 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 FUCA2Q9BTY2 467 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 SHANK3Q9BYB0 1731 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 JCADQ9P266 1359 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 OFD1O75665 1012 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 PTMAP06454 111 aaKnown RBP7.54□□□□□ -1.2
CHD6-202ENST00000373222 CCT2P78371 535 aaKnown RBP7.54□□□□□ -1.2
CHD6-202ENST00000373222 SCARF1Q14162 830 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 RBM46Q8TBY0 533 aaKnown RBP7.54□□□□□ -1.2
CHD6-202ENST00000373222 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 SH2B1Q9NRF2 756 aaPredicted RBP7.54□□□□□ -1.2
CHD6-202ENST00000373222 TOGARAM1Q9Y4F4 1720 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 UBR2Q8IWV8 1755 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 GUCY1B3Q02153 619 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 APOBRQ0VD83 1088 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 SCRN1Q12765 414 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 LAPTM4AQ15012 233 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 TMEM92Q6UXU6 159 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 TSC1Q92574 1164 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 SYAP1Q96A49 352 aaPredicted RBP7.54□□□□□ -1.2
CHD6-202ENST00000373222 FAM89AQ96GI7 184 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 ZSCAN31Q96LW9 406 aaPredicted RBP7.54□□□□□ -1.2
CHD6-202ENST00000373222 NEK1Q96PY6 1258 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 HAUS7Q99871 368 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 NAP1L2Q9ULW6 460 aaPredicted RBP7.54□□□□□ -1.2
CHD6-202ENST00000373222 NWD2Q9ULI1 1742 aa7.54□□□□□ -1.2
CHD6-202ENST00000373222 KCPQ6ZWJ8 1503 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 H7C1W4 665 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 M0R2C6 588 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 ERCC3P19447 782 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 HAND2P61296 217 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 USPL1Q5W0Q7 1092 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 SPC24Q8NBT2 197 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 ZCRB1Q8TBF4 217 aaKnown RBP7.53□□□□□ -1.2
CHD6-202ENST00000373222 ERCC4Q92889 916 aaPredicted RBP7.53□□□□□ -1.2
CHD6-202ENST00000373222 PGBD1Q96JS3 809 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 DACT1Q9NYF0 836 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 ASAP1Q9ULH1 1129 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 TBC1D2BQ9UPU7 963 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 EP400Q96L91 3159 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 MYH15Q9Y2K3 1946 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 A0A1B0GUL7 405 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 FAM177BA6PVY3 158 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 HIP1O00291 1037 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 NR1I2O75469 434 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 CTDNEP1O95476 244 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 PSMA5P28066 241 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.2
CHD6-202ENST00000373222 SF3A1Q15459 793 aaKnown RBP7.53□□□□□ -1.2
CHD6-202ENST00000373222 MCMDC2Q4G0Z9 681 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 LUZP1Q86V48 1076 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 GTF3C6Q969F1 213 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 TMUB1Q9BVT8 246 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 GJB4Q9NTQ9 266 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 PAG1Q9NWQ8 432 aa7.53□□□□□ -1.2
CHD6-202ENST00000373222 CWC25Q9NXE8 425 aaPredicted RBP7.53□□□□□ -1.2
CHD6-202ENST00000373222 PALLDQ8WX93 1383 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 FOXP2O15409 715 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 ZNF500O60304 480 aaPredicted RBP7.52□□□□□ -1.21
CHD6-202ENST00000373222 GPTP24298 496 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 OTUD7BQ6GQQ9 843 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 POTEEQ6S8J3 1075 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 KBTBD3Q8NAB2 608 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 OSBP2Q969R2 916 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 PPP1R12CQ9BZL4 782 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 EMILIN3Q9NT22 766 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 LMTK3Q96Q04 1460 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.52□□□□□ -1.21
CHD6-202ENST00000373222 MAST3O60307 1309 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 WDR17Q8IZU2 1322 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 COL5A2P05997 1499 aaPredicted RBP7.52□□□□□ -1.21
CHD6-202ENST00000373222 SNAP23O00161 211 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 ARHGAP33O14559 1287 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 HRO43593 1189 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 MICALL2Q8IY33 904 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 LEO1Q8WVC0 666 aaPredicted RBP7.52□□□□□ -1.21
CHD6-202ENST00000373222 PKNOX2Q96KN3 472 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 CCDC39Q9UFE4 941 aa7.52□□□□□ -1.21
CHD6-202ENST00000373222 PHF14O94880 888 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 RECKO95980 971 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 HSPD1P10809 573 aaKnown RBP7.51□□□□□ -1.21
CHD6-202ENST00000373222 KRT85P78386 507 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 HIC1Q14526 733 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 HLFQ16534 295 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 DNAJC10Q8IXB1 793 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 KCNF1Q9H3M0 494 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.51□□□□□ -1.21
CHD6-202ENST00000373222 ATP6V1DQ9Y5K8 247 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 ZNF335Q9H4Z2 1342 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms