RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 BICDL2A1A5D9 508 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 DNA2P51530 1060 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.253e-8■□□□□ 8.8
DEPDC1-201ENST00000370966 RRP36Q96EU6 259 aaKnown RBP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 DSCC1Q9BVC3 393 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 B4E1Z4 1266 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 POLR3GO15318 223 aaPredicted RBP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 KRT83P78385 493 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 DTHD1Q6ZMT9 781 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 SYCP3Q8IZU3 236 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 LEO1Q8WVC0 666 aaPredicted RBP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 LPIN2Q92539 896 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 BTG4Q9NY30 223 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 NSFL1CQ9UNZ2 370 aaKnown RBP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 GBP2P32456 591 aaPredicted RBP13.46□□□□□ -0.25
DEPDC1-201ENST00000370966 IFFO1Q0D2I5 559 aa13.46□□□□□ -0.25
DEPDC1-201ENST00000370966 HLTFQ14527 1009 aaKnown RBP eCLIP13.46□□□□□ -0.25
DEPDC1-201ENST00000370966 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.25
DEPDC1-201ENST00000370966 ERVV-2B6SEH9 535 aa13.46□□□□□ -0.25
DEPDC1-201ENST00000370966 RXRAP19793 462 aa13.46□□□□□ -0.26
DEPDC1-201ENST00000370966 OSBPL3Q9H4L5 887 aa13.46□□□□□ -0.26
DEPDC1-201ENST00000370966 ZSWIM4Q9H7M6 989 aa13.46□□□□□ -0.26
DEPDC1-201ENST00000370966 YEATS2Q9ULM3 1422 aa13.46□□□□□ -0.26
DEPDC1-201ENST00000370966 PPP1R2P41236 205 aa13.46□□□□□ -0.26
DEPDC1-201ENST00000370966 BEND3Q5T5X7 828 aa13.46□□□□□ -0.26
DEPDC1-201ENST00000370966 STAP2Q9UGK3 403 aa13.46□□□□□ -0.26
DEPDC1-201ENST00000370966 KDRP35968 1356 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 SPECC1Q5M775 1068 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 CEP112Q8N8E3 955 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 PRDM15P57071 1507 aaPredicted RBP13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 KRT86O43790 486 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 MYO1BO43795 1136 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 TUBBP07437 444 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 FAM107BQ9H098 131 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 FAM173BQ6P4H8 233 aa13.45□□□□□ -0.26
DEPDC1-201ENST00000370966 TACC1O75410 805 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 ZNF594Q96JF6 807 aaPredicted RBP13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 PLA2R1Q13018 1463 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 USP37Q86T82 979 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 CNGA4Q8IV77 575 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 KIF5AQ12840 1032 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 PAF1Q8N7H5 531 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 DYDC1Q8WWB3 177 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 EAF2Q96CJ1 260 aaPredicted RBP13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 SAMM50Q9Y512 469 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 CTAGE9A4FU28 777 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 CUTAO60888 179 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 EZRP15311 586 aaKnown RBP13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 HSPA2P54652 639 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 TCIRG1Q13488 830 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 CTR9Q6PD62 1173 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 DNAJC10Q8IXB1 793 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 NCOA5Q9HCD5 579 aaKnown RBP13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■■□□ 15.8
DEPDC1-201ENST00000370966 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
DEPDC1-201ENST00000370966 PREX2Q70Z35 1606 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 CERS3Q8IU89 383 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 ANKRD62A6NC57 917 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 GCOM1H8Y6P7 765 aaPredicted RBP13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 MYZAPP0CAP1 466 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 DIS3L2Q8IYB7 885 aaKnown RBP13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 OGFOD1Q8N543 542 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 CCDC42Q96M95 316 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 HDAC9Q9UKV0 1011 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 MCM7P33993 719 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 LUC7L2Q9Y383 392 aaKnown RBP13.43□□□□□ -0.26
DEPDC1-201ENST00000370966 METP08581 1390 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 MROH5Q6ZUA9 1318 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 PHKG2P15735 406 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 HIBADHP31937 336 aaKnown RBP13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 STX17P56962 302 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 CCDC174Q6PII3 467 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 PLCD1P51178 756 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 NAP1L4Q99733 375 aaKnown RBP13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 ZKSCAN3Q9BRR0 538 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 EFCAB6Q5THR3 1501 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 PICALMQ13492 652 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 MICALCLQ6ZW33 695 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 TBC1D5Q92609 795 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 PLEKHG1Q9ULL1 1385 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 SPDYE3A6NKU9 549 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 MLKLQ8NB16 471 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 GOLGA1Q92805 767 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 ARMT1Q9H993 441 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
DEPDC1-201ENST00000370966 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms