RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 NUDCD3Q8IVD9 361 aa9.71□□□□□ -0.86
VANGL1-204ENST00000369510 C19orf60Q96EN9 201 aa9.71□□□□□ -0.86
VANGL1-204ENST00000369510 C1orf115Q9H7X2 142 aa9.71□□□□□ -0.86
VANGL1-204ENST00000369510 APOA1P02647 267 aa9.71□□□□□ -0.86
VANGL1-204ENST00000369510 KRT7P08729 469 aa9.71□□□□□ -0.86
VANGL1-204ENST00000369510 SELENOSQ9BQE4 189 aa9.71□□□□□ -0.86
VANGL1-204ENST00000369510 ZNF644Q9H582 1327 aaPredicted RBP9.71□□□□□ -0.86
VANGL1-204ENST00000369510 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.86
VANGL1-204ENST00000369510 H0YC42 278 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 SERPINB10P48595 397 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 STX3Q13277 289 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 RAB3GAP1Q15042 981 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 RUNDC1Q96C34 613 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 DTNBP1Q96EV8 351 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 TCP11L1Q9NUJ3 509 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 UBTFL1P0CB47 393 aaPredicted RBP9.7□□□□□ -0.86
VANGL1-204ENST00000369510 XRCC6P12956 609 aaKnown RBP eCLIP9.7□□□□□ -0.86
VANGL1-204ENST00000369510 DIXDC1Q155Q3 683 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 OCA2Q04671 838 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 NSMCE1Q8WV22 266 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 TUBB1Q9H4B7 451 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 HDDC2Q7Z4H3 204 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 MTMR3Q13615 1198 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 KAT6BQ8WYB5 2073 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 GSNP06396 782 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 KRT5P13647 590 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 LMNB1P20700 586 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 PPP2R5EQ16537 467 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 GRAMD4Q6IC98 578 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 RFWD2Q8NHY2 731 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 SYNJ2O15056 1496 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 POGZQ7Z3K3 1410 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 UVSSAQ2YD98 709 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 ANKRD20A3Q5VUR7 823 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 LRRC8BQ6P9F7 803 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 CCDC84Q86UT8 332 aaPredicted RBP9.7□□□□□ -0.86
VANGL1-204ENST00000369510 OR9Q1Q8NGQ5 310 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 TMOD4Q9NZQ9 345 aa9.7□□□□□ -0.86
VANGL1-204ENST00000369510 CARSP49589 748 aaKnown RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 PAXIP1Q6ZW49 1069 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 EFCAB8A8MWE9 144 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 MX2P20592 715 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 ZKSCAN8Q15776 578 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 NLRP4Q96MN2 994 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 NFKBIL1Q9UBC1 381 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 SERPINB2P05120 415 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 BBOF1Q8ND07 529 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 NEUROD6Q96NK8 337 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 MIS12Q9H081 205 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 DDX19AQ9NUU7 478 aaKnown RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 RAD50Q92878 1312 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 KRT13P13646 458 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 SYCP3Q8IZU3 236 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 ZNF830Q96NB3 372 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 SH2D4AQ9H788 454 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 FBXO2Q9UK22 296 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 SESN3P58005 492 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 RAB14P61106 215 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 DYNC1I2Q13409 638 aaKnown RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 ACTR5Q9H9F9 607 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 ATP2C2O75185 946 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 RHOBTB1O94844 696 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 RNF207Q6ZRF8 634 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 SH3GL2Q99962 352 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 KLHL31Q9H511 634 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 ATP6V0A2Q9Y487 856 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 PLEKHO1Q53GL0 409 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-204ENST00000369510 GAS2L2Q8NHY3 880 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 MPP6Q9NZW5 540 aa9.69□□□□□ -0.86
VANGL1-204ENST00000369510 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 ST13P4Q8IZP2 240 aaPredicted RBP9.68□□□□□ -0.86
VANGL1-204ENST00000369510 PPME1Q9Y570 386 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 NLRP6P59044 892 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 PPP1R7Q15435 360 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 KRT80Q6KB66 452 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 THEMISQ8N1K5 641 aaPredicted RBP9.68□□□□□ -0.86
VANGL1-204ENST00000369510 MICAL1Q8TDZ2 1067 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 PARP2Q9UGN5 583 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 KRT87PA6NCN2 255 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 E7EVH7 732 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 HDAC4P56524 1084 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 TAF12Q16514 161 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 KMT5BQ4FZB7 885 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 ATF7IPQ6VMQ6 1270 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
VANGL1-204ENST00000369510 ABTB2Q8N961 1025 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 GCC1Q96CN9 775 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 SH2B1Q9NRF2 756 aaPredicted RBP9.68□□□□□ -0.86
VANGL1-204ENST00000369510 TROVE2P10155 538 aaKnown RBP eCLIP9.68□□□□□ -0.86
VANGL1-204ENST00000369510 SEL1L2Q5TEA6 688 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 RASIP1Q5U651 963 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 RNF216Q9NWF9 866 aaPredicted RBP9.68□□□□□ -0.86
VANGL1-204ENST00000369510 ATP2B2Q01814 1243 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 MED21Q13503 144 aa9.68□□□□□ -0.86
VANGL1-204ENST00000369510 ARHGAP44Q17R89 818 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms