RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 MPHOSPH10O00566 681 aaKnown RBP9.73□□□□□ -0.85
PTPRK-206ENST00000368215 DYNC1I1O14576 645 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 ANO1Q5XXA6 986 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 SPATA5Q8NB90 893 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 KAT14Q9H8E8 782 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 PDIA3P30101 505 aaKnown RBP9.73□□□□□ -0.85
PTPRK-206ENST00000368215 CEP135Q66GS9 1140 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 BRINP3Q76B58 766 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
PTPRK-206ENST00000368215 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 DHX58Q96C10 678 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 TTC14Q96N46 770 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 CCDC87Q9NVE4 849 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.73□□□□□ -0.851e-8■■■□□ 16
PTPRK-206ENST00000368215 V9GYY5 206 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-206ENST00000368215 NEMFO60524 1076 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 PRIMPOLQ96LW4 560 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 AK7Q96M32 723 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 PDCL3Q9H2J4 239 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 ZNF219Q9P2Y4 722 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-206ENST00000368215 DIP2AQ14689 1571 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 MYO5BQ9ULV0 1848 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 KRT18P05783 430 aaKnown RBP9.73□□□□□ -0.85
PTPRK-206ENST00000368215 KRT40Q6A162 431 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 SMARCC1Q92922 1105 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-206ENST00000368215 SPATA31A3Q5VYP0 1347 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 MAP3K15Q6ZN16 1313 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 PDE6AP16499 860 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 BCAMP50895 628 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 SNW1Q13573 536 aaKnown RBP9.72□□□□□ -0.85
PTPRK-206ENST00000368215 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
PTPRK-206ENST00000368215 PIGBQ92521 554 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 CABP5Q9NP86 173 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 MCM9Q9NXL9 1143 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 KCNJ14Q9UNX9 436 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 SIGLEC1Q9BZZ2 1709 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 H7C1W4 665 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 CYP2E1P05181 493 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-206ENST00000368215 STX17P56962 302 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 TSC1Q92574 1164 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 UBXN4Q92575 508 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 TFCP2L1Q9NZI6 479 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 SNAP23O00161 211 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 GNAT2P19087 354 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 NBPF14Q5TI25 921 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
PTPRK-206ENST00000368215 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 TANGO6Q9C0B7 1094 aa9.72□□□□□ -0.85
PTPRK-206ENST00000368215 PUS7LQ9H0K6 701 aaKnown RBP9.72□□□□□ -0.85
PTPRK-206ENST00000368215 SEC63Q9UGP8 760 aaKnown RBP9.72□□□□□ -0.85
PTPRK-206ENST00000368215 TRIM75PA6NK02 468 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 EPS15P42566 896 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 KCNQ4P56696 695 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 GPS2Q13227 327 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 ARHGAP29Q52LW3 1261 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 NSUN7Q8NE18 718 aaKnown RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 ZNF335Q9H4Z2 1342 aaPredicted RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 F8W031 263 aaPredicted RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 GNPATO15228 680 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 ZNF75DP51815 510 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 EIF5P55010 431 aaKnown RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 TOB2Q14106 344 aaPredicted RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 FAM98CQ17RN3 349 aaKnown RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 DIS3L2Q8IYB7 885 aaKnown RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 ZNF274Q96GC6 653 aaPredicted RBP9.71□□□□□ -0.85
PTPRK-206ENST00000368215 TMEM87BQ96K49 555 aa9.71□□□□□ -0.85
PTPRK-206ENST00000368215 KIF20BQ96Q89 1820 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 NCAPD2Q15021 1401 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 ZNF202O95125 648 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 KIF5BP33176 963 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 HLFQ16534 295 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 KLHL34Q8N239 644 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 PDE8BO95263 885 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 LRMPQ12912 555 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 PARP10Q53GL7 1025 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 ATL3Q6DD88 541 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 CCDC70Q6NSX1 233 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 SEC31BQ9NQW1 1179 aa9.71□□□□□ -0.86
PTPRK-206ENST00000368215 ZNHIT6Q9NWK9 470 aaKnown RBP9.71□□□□□ -0.86
PTPRK-206ENST00000368215 BAG3O95817 575 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 GYG1P46976 350 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 TAF6LQ9Y6J9 622 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 CEMIPQ8WUJ3 1361 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 TSPY3P0CV98 308 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 TSPY8P0CW00 308 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 DDIT3P35638 169 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 UBA7P41226 1012 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 SDR42E1Q8WUS8 393 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 ZNF287Q9HBT7 754 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 TCEAL9Q9UHQ7 104 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 ZSCAN12O43309 604 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 CLEC17AQ6ZS10 378 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 KRI1Q8N9T8 703 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms