RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 REC114Q7Z4M0 266 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZNF598Q86UK7 904 aaKnown RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LSRQ86X29 649 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LINC00528Q8N1L1 170 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PGBD3Q8N328 593 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 C19orf47Q8N9M1 422 aaKnown RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZSWIM2Q8NEG5 633 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 FBXO27Q8NI29 283 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 JARID2Q92833 1246 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CNTNAP3BQ96NU0 1288 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 IER2Q9BTL4 223 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CNTNAP3Q9BZ76 1288 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GSX2Q9BZM3 304 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZCCHC2Q9C0B9 1178 aaKnown RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 BHLHE41Q9C0J9 482 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TNKS2Q9H2K2 1166 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 BRMS1Q9HCU9 246 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TMEM39AQ9NV64 488 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TLR7Q9NYK1 1049 aaKnown RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TCEAL9Q9UHQ7 104 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GPN3Q9UHW5 284 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PTCH2Q9Y6C5 1203 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CCDC163A0A0D9SF12 145 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TTC24A2A3L6 582 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 KHNYNO15037 678 aaKnown RBP5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PEX14O75381 377 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PAGE1O75459 146 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 HOXD8P13378 290 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PLAURQ03405 335 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SSRP1Q08945 709 aaKnown RBP5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PPP2R5EQ16537 467 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LONRF2Q1L5Z9 754 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZC3H12BQ5HYM0 836 aaKnown RBP5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZNF697Q5TEC3 545 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 KRT25Q7Z3Z0 450 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CEP120Q8N960 986 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TMEM102Q8N9M5 508 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 RNF217Q8TC41 542 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 C8orf48Q96LL4 319 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 RBSNQ9H1K0 784 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZNF576Q9H609 170 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 EHMT1Q9H9B1 1298 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ATP8A1Q9Y2Q0 1164 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PCDHB5Q9Y5E4 795 aa5.03□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ALG1L2C9J202 215 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 J3QL48 77 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EIF3JO75822 258 aaKnown RBP5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PMLP29590 882 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CNGA1P29973 690 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TBX4P57082 545 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CLCQ05315 142 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 FOXC1Q12948 553 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 LBRQ14739 615 aaKnown RBP5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SPRED3Q2MJR0 410 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 LRRFIP1Q32MZ4 808 aaKnown RBP5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EFHC2Q5JST6 749 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SCARA3Q6AZY7 606 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SMC5Q8IY18 1101 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CCDC146Q8IYE0 955 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CHAC2Q8WUX2 184 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NXPE3Q969Y0 559 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 RELTQ969Z4 430 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PLD4Q96BZ4 506 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PNMA5Q96PV4 448 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PKD2L1Q9P0L9 805 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 GABBR1Q9UBS5 961 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PFDN2Q9UHV9 154 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ZMYM5Q9UJ78 669 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SLC12A7Q9Y666 1083 aa5.02□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NFKBIEO00221 500 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 KCNQ2O43526 872 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PRC1O43663 620 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 DIAPH1O60610 1272 aaKnown RBP5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ATE1O95260 518 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MAP3K6O95382 1288 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 F11P03951 625 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 FAM157BP0CG42 384 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 BMP6P22004 513 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NME2P22392 152 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 FAAP100Q0VG06 881 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 LAMC2Q13753 1193 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TM4SF20Q53R12 229 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TMEM67Q5HYA8 995 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 FIGNL1Q6PIW4 674 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SPATC1Q76KD6 591 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 FAM178BQ8IXR5 827 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 FAM9AQ8IZU1 332 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CYP4X1Q8N118 509 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NINJ1Q92982 152 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MFSD3Q96ES6 412 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SGSM3Q96HU1 749 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TRERF1Q96PN7 1200 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SLC26A8Q96RN1 970 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TM9SF2Q99805 663 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EMILIN2Q9BXX0 1053 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 RUBCNLQ9H714 662 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ZFATQ9P243 1243 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PRR12Q9ULL5 1215 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 DYRK1BQ9Y463 629 aa5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CD2APQ9Y5K6 639 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms