RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 LACRTQ9GZZ8 138 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 SH2B1Q9NRF2 756 aaPredicted RBP5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 CYP8B1Q9UNU6 501 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 STARD13Q9Y3M8 1113 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 RGS9O75916 674 aaPredicted RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 EPXP11678 715 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 EPHA1P21709 976 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 ARNTP27540 789 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 ZNF157P51786 506 aaPredicted RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 SRSF11Q05519 484 aaKnown RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 IKBKEQ14164 716 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 LRRC14Q15048 493 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 RNFT1Q5M7Z0 435 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 XP32Q5T750 250 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 SOGA3Q5TF21 947 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 DPH6Q7L8W6 267 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 SLITRK4Q8IW52 837 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 DDX54Q8TDD1 881 aaKnown RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 DNAJC2Q99543 621 aaKnown RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 HIRIP3Q9BW71 556 aaPredicted RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 COL25A1Q9BXS0 654 aaPredicted RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 EMILIN2Q9BXX0 1053 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 LRRC3Q9BY71 257 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 SOX17Q9H6I2 414 aaPredicted RBP5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 GINM1Q9NU53 330 aa5.77□□□□□ -1.49
RNU6-28P-201ENST00000362378 FAM221AA4D161 298 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 FAM177BA6PVY3 158 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 H3BRJ5 948 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 SOX1O00570 391 aaPredicted RBP5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 STK10O94804 968 aaKnown RBP5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 BAG6P46379 1132 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 NASPP49321 788 aaPredicted RBP5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 CABP4P57796 275 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 ZNF252P-AS1Q0IIN9 211 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 GDF6Q6KF10 455 aaPredicted RBP5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 KANK3Q6NY19 840 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 SULF2Q8IWU5 870 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 STK35Q8TDR2 534 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 GATAD2BQ8WXI9 593 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 WNT8BQ93098 351 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 MIR1-1HGQ9H1L0 117 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 UBP1Q9NZI7 540 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 STRIP2Q9ULQ0 834 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 EFR3BQ9Y2G0 817 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 PCDHB5Q9Y5E4 795 aa5.76□□□□□ -1.49
RNU6-28P-201ENST00000362378 TERTO14746 1132 aaKnown RBP5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 F13A1P00488 732 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 CRKP46108 304 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 APOBRQ0VD83 1088 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 AP3B2Q13367 1082 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 LLGL2Q6P1M3 1020 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 BNC2Q6ZN30 1099 aaPredicted RBP5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 PDZD3Q86UT5 571 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 NUDT8Q8WV74 236 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 NKD1Q969G9 470 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 ACDQ96AP0 544 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 LNPKQ9C0E8 428 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 CACNA2D2Q9NY47 1150 aa5.75□□□□□ -1.49
RNU6-28P-201ENST00000362378 ERBB4Q15303 1308 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 CILPO75339 1184 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 ALBP02768 609 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 LMNB1P20700 586 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 AFF1P51825 1210 aaKnown RBP5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 PIP4K2BP78356 416 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 KRT76Q01546 638 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 MPP2Q14168 576 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 C1orf229Q6ZS94 237 aaPredicted RBP5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 ILDR2Q71H61 639 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 IL22RA1Q8N6P7 574 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 GRIN3AQ8TCU5 1115 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 SLC16A10Q8TF71 515 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 GAL3ST3Q96A11 431 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 JPH1Q9HDC5 661 aaPredicted RBP5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 OSGEPQ9NPF4 335 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 PRDM6Q9NQX0 595 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 LRRC4BQ9NT99 713 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 PPME1Q9Y570 386 aa5.74□□□□□ -1.49
RNU6-28P-201ENST00000362378 TRIM37O94972 964 aa5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 SSBP05455 408 aaKnown RBP eCLIP5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 NBPF6Q5VWK0 638 aa5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 NOP9Q86U38 636 aaKnown RBP5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 KRTAP1-3Q8IUG1 177 aa5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 EDARADDQ8WWZ3 215 aa5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 NBPF4Q96M43 638 aa5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 NRSN2Q9GZP1 204 aa5.73□□□□□ -1.49
RNU6-28P-201ENST00000362378 TM4SF5O14894 197 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 LILRB5O75023 590 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 ADAMTS2O95450 1211 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 GSTP1P09211 210 aaKnown RBP5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 SLURP2P0DP57 97 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 ARL4DP49703 201 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 C19orf57Q0VDD7 668 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 SEPT6Q14141 434 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 CCDC144BQ3MJ40 725 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 HGSNATQ68CP4 663 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 DIEXFQ68CQ4 756 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms