RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 NCAPD2Q15021 1401 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 BCS1LQ9Y276 419 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 SERPINB2P05120 415 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 MPHOSPH6Q99547 160 aaKnown RBP15.92■□□□□ 0.14
CTR9-201ENST00000361367 BRPF3Q9ULD4 1205 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 BCORL1Q5H9F3 1711 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 PTPRMP28827 1452 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 CPSF1Q10570 1443 aaKnown RBP15.91■□□□□ 0.14
CTR9-201ENST00000361367 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
CTR9-201ENST00000361367 MARCKSP29966 332 aaPredicted RBP15.91■□□□□ 0.14
CTR9-201ENST00000361367 KLHL40Q2TBA0 621 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 GNA11P29992 359 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 GRM1Q13255 1194 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 ERMNQ8TAM6 284 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 RBM28Q9NW13 759 aaKnown RBP15.91■□□□□ 0.14
CTR9-201ENST00000361367 NEXMIFQ5QGS0 1516 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 QRICH2Q9H0J4 1663 aa15.91■□□□□ 0.14
CTR9-201ENST00000361367 SPDYE3A6NKU9 549 aa15.9■□□□□ 0.14
CTR9-201ENST00000361367 FGFR1OPO95684 399 aaKnown RBP15.9■□□□□ 0.14
CTR9-201ENST00000361367 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
CTR9-201ENST00000361367 SEPT11Q9NVA2 429 aaKnown RBP15.9■□□□□ 0.14
CTR9-201ENST00000361367 LAMC1P11047 1609 aa15.9■□□□□ 0.14
CTR9-201ENST00000361367 SETD1BQ9UPS6 1966 aaKnown RBP15.9■□□□□ 0.14
CTR9-201ENST00000361367 FKBP15Q5T1M5 1219 aa15.9■□□□□ 0.14
CTR9-201ENST00000361367 TTF2Q9UNY4 1162 aaKnown RBP15.9■□□□□ 0.14
CTR9-201ENST00000361367 TXLNBQ8N3L3 684 aa15.9■□□□□ 0.14
CTR9-201ENST00000361367 GSPT1P15170 499 aaKnown RBP15.9■□□□□ 0.14
CTR9-201ENST00000361367 UBE4AQ14139 1066 aa15.9■□□□□ 0.14
CTR9-201ENST00000361367 TCP10Q12799 353 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 PLS1Q14651 629 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 TGFBRAP1Q8WUH2 860 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 MRPS27Q92552 414 aaKnown RBP15.89■□□□□ 0.13
CTR9-201ENST00000361367 ATG3Q9NT62 314 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 ARGLU1Q9NWB6 273 aaPredicted RBP15.89■□□□□ 0.13
CTR9-201ENST00000361367 ZNF165P49910 485 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 DLGAP5Q15398 846 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 STX1AQ16623 288 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 HAUS7Q99871 368 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 CIAO1O76071 339 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 PDE6AP16499 860 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 KRT2P35908 639 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 CTDSPL2Q05D32 466 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 ISM2Q6H9L7 571 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 USP48Q86UV5 1035 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 DSCC1Q9BVC3 393 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 PNPLA6Q8IY17 1366 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 SPTLC2O15270 562 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
CTR9-201ENST00000361367 ERFEQ4G0M1 354 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 FAM177A1Q8N128 213 aaPredicted RBP15.89■□□□□ 0.13
CTR9-201ENST00000361367 SEC31BQ9NQW1 1179 aa15.89■□□□□ 0.13
CTR9-201ENST00000361367 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
CTR9-201ENST00000361367 ZNF804BA4D1E1 1349 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 PIK3C2BO00750 1634 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 PHKA1P46020 1223 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 LRRC27Q9C0I9 530 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
CTR9-201ENST00000361367 SYT1P21579 422 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
CTR9-201ENST00000361367 TEKT1Q969V4 418 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 EPB41L2O43491 1005 aaKnown RBP15.88■□□□□ 0.13
CTR9-201ENST00000361367 LIG1P18858 919 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 MED14O60244 1454 aa15.88■□□□□ 0.13
CTR9-201ENST00000361367 A0A0D9SFI3 127 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 GPCPD1Q9NPB8 672 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 HSPA4P34932 840 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 JCADQ9P266 1359 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 PATL2C9JE40 543 aaKnown RBP15.87■□□□□ 0.13
CTR9-201ENST00000361367 STAT6P42226 847 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 DOK7Q18PE1 504 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 BRAPQ7Z569 592 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 NCOA5Q9HCD5 579 aaKnown RBP15.87■□□□□ 0.13
CTR9-201ENST00000361367 GPR108Q9NPR9 543 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 ADORA1P30542 326 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 AFMP43652 599 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 GIMAP6Q6P9H5 292 aa15.87■□□□□ 0.13
CTR9-201ENST00000361367 USP17L12C9JPN9 530 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 USP17L21D6R901 530 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 TBCAO75347 108 aaKnown RBP15.86■□□□□ 0.13
CTR9-201ENST00000361367 STXBP4Q6ZWJ1 553 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 ARHGEF10LQ9HCE6 1279 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 USP25Q9UHP3 1055 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 XDHP47989 1333 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 RPS6KA4O75676 772 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 SEC62Q99442 399 aaKnown RBP15.86■□□□□ 0.13
CTR9-201ENST00000361367 PICK1Q9NRD5 415 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 USP40Q9NVE5 1235 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 DACT1Q9NYF0 836 aa15.86■□□□□ 0.13
CTR9-201ENST00000361367 TOP1P11387 765 aaKnown RBP15.86■□□□□ 0.13
CTR9-201ENST00000361367 MTIF2P46199 727 aaKnown RBP15.85■□□□□ 0.13
CTR9-201ENST00000361367 AKNAD1Q5T1N1 836 aa15.85■□□□□ 0.13
CTR9-201ENST00000361367 KIAA0825Q8IV33 1275 aa15.85■□□□□ 0.13
CTR9-201ENST00000361367 CRB1P82279 1406 aa15.85■□□□□ 0.13
CTR9-201ENST00000361367 RUFY1Q96T51 708 aa15.85■□□□□ 0.13
CTR9-201ENST00000361367 CAVIN2O95810 425 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms