RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 FBXO38Q6PIJ6 1188 aa18.85■□□□□ 0.61
IFT140-201ENST00000361339 CLSTN2Q9H4D0 955 aa18.85■□□□□ 0.61
IFT140-201ENST00000361339 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
IFT140-201ENST00000361339 ZNF165P49910 485 aa18.85■□□□□ 0.61
IFT140-201ENST00000361339 AIFM3Q96NN9 605 aa18.85■□□□□ 0.61
IFT140-201ENST00000361339 SALL1Q9NSC2 1324 aa18.85■□□□□ 0.61
IFT140-201ENST00000361339 KDM4FA0A1W2PPD8 638 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 PRC1O43663 620 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 POLR3DP05423 398 aaPredicted RBP18.84■□□□□ 0.61
IFT140-201ENST00000361339 CTSWP56202 376 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 ACSBG1Q96GR2 724 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 HMGB1P09429 215 aaKnown RBP18.84■□□□□ 0.61
IFT140-201ENST00000361339 TRIM28Q13263 835 aaKnown RBP18.84■□□□□ 0.61
IFT140-201ENST00000361339 SLC9C2Q5TAH2 1124 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 STK11IPQ8N1F8 1099 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 TIGD1Q96MW7 591 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 WWC3Q9ULE0 1092 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 MORC2Q9Y6X9 1032 aaPredicted RBP18.84■□□□□ 0.61
IFT140-201ENST00000361339 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.84■□□□□ 0.61
IFT140-201ENST00000361339 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 UBE2Q2LH0YL09 131 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 HPS5Q9UPZ3 1129 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 AKAP2Q9Y2D5 859 aa18.84■□□□□ 0.61
IFT140-201ENST00000361339 CARMIL3Q8ND23 1372 aa18.83■□□□□ 0.61
IFT140-201ENST00000361339 CCDC66A2RUB6 948 aa18.83■□□□□ 0.61
IFT140-201ENST00000361339 PTPN14Q15678 1187 aa18.83■□□□□ 0.61
IFT140-201ENST00000361339 TBC1D10CQ8IV04 446 aa18.83■□□□□ 0.61
IFT140-201ENST00000361339 CCAR1Q8IX12 1150 aaKnown RBP18.83■□□□□ 0.6
IFT140-201ENST00000361339 APPBP2Q92624 585 aa18.83■□□□□ 0.6
IFT140-201ENST00000361339 SEC31BQ9NQW1 1179 aa18.83■□□□□ 0.6
IFT140-201ENST00000361339 GOLGA8BA8MQT2 603 aa18.82■□□□□ 0.6
IFT140-201ENST00000361339 C11orf57Q6ZUT1 292 aaPredicted RBP18.82■□□□□ 0.6
IFT140-201ENST00000361339 MB21D2Q8IYB1 491 aaPredicted RBP18.82■□□□□ 0.6
IFT140-201ENST00000361339 VGLL2Q8N8G2 317 aa18.82■□□□□ 0.6
IFT140-201ENST00000361339 PAXBP1Q9Y5B6 917 aa18.82■□□□□ 0.6
IFT140-201ENST00000361339 MYO5AQ9Y4I1 1855 aaKnown RBP18.82■□□□□ 0.6
IFT140-201ENST00000361339 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
IFT140-201ENST00000361339 SLIT2O94813 1529 aa18.82■□□□□ 0.6
IFT140-201ENST00000361339 WTIPA6NIX2 430 aaPredicted RBP18.81■□□□□ 0.6
IFT140-201ENST00000361339 POLR3GO15318 223 aaPredicted RBP18.81■□□□□ 0.6
IFT140-201ENST00000361339 APPP05067 770 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 IMMTQ16891 758 aaKnown RBP18.81■□□□□ 0.6
IFT140-201ENST00000361339 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 PLA2G12BQ9BX93 195 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 SKILP12757 684 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 CYB5R4Q7L1T6 521 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 LLPHQ9BRT6 129 aaKnown RBP18.81■□□□□ 0.6
IFT140-201ENST00000361339 ANKRD18BA2A2Z9 1011 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 RBM6P78332 1123 aaKnown RBP18.81■□□□□ 0.6
IFT140-201ENST00000361339 CCDC102BQ68D86 513 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 ZNF397Q8NF99 534 aaPredicted RBP18.81■□□□□ 0.6
IFT140-201ENST00000361339 MYL10Q9BUA6 226 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 DDX19AQ9NUU7 478 aaKnown RBP18.81■□□□□ 0.6
IFT140-201ENST00000361339 CLIC4Q9Y696 253 aa18.81■□□□□ 0.6
IFT140-201ENST00000361339 KIF28PB7ZC32 967 aa18.8■□□□□ 0.6
IFT140-201ENST00000361339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.8■□□□□ 0.6
IFT140-201ENST00000361339 ZFP91Q96JP5 570 aaPredicted RBP18.8■□□□□ 0.6
IFT140-201ENST00000361339 TRIM34Q9BYJ4 488 aa18.8■□□□□ 0.6
IFT140-201ENST00000361339 ZSCAN16Q9H4T2 348 aaPredicted RBP18.8■□□□□ 0.6
IFT140-201ENST00000361339 GOLGA6L19H0YKK7 550 aa18.8■□□□□ 0.6
IFT140-201ENST00000361339 BCL9O00512 1426 aa18.8■□□□□ 0.6
IFT140-201ENST00000361339 ITGB4P16144 1822 aa18.8■□□□□ 0.6
IFT140-201ENST00000361339 ME1P48163 572 aa18.8■□□□□ 0.6
IFT140-201ENST00000361339 NAA16Q6N069 864 aaPredicted RBP18.8■□□□□ 0.6
IFT140-201ENST00000361339 ZNF274Q96GC6 653 aaPredicted RBP18.8■□□□□ 0.6
IFT140-201ENST00000361339 ZNF532Q9HCE3 1301 aa18.8■□□□□ 0.6
IFT140-201ENST00000361339 ADAMTS2O95450 1211 aa18.79■□□□□ 0.6
IFT140-201ENST00000361339 SNW1Q13573 536 aaKnown RBP18.79■□□□□ 0.6
IFT140-201ENST00000361339 ERCC6LQ2NKX8 1250 aa18.79■□□□□ 0.6
IFT140-201ENST00000361339 ZNF213O14771 459 aa18.79■□□□□ 0.6
IFT140-201ENST00000361339 ADD2P35612 726 aa18.79■□□□□ 0.6
IFT140-201ENST00000361339 RBM43Q6ZSC3 357 aaKnown RBP18.79■□□□□ 0.6
IFT140-201ENST00000361339 LRRN4CLQ8ND94 238 aa18.79■□□□□ 0.6
IFT140-201ENST00000361339 IQSEC3Q9UPP2 1182 aaPredicted RBP18.79■□□□□ 0.6
IFT140-201ENST00000361339 TACC3Q9Y6A5 838 aa18.79■□□□□ 0.6
IFT140-201ENST00000361339 A0A1B0GVL5 298 aa18.78■□□□□ 0.6
IFT140-201ENST00000361339 KCNQ4P56696 695 aa18.78■□□□□ 0.6
IFT140-201ENST00000361339 SUSD4Q5VX71 490 aa18.78■□□□□ 0.6
IFT140-201ENST00000361339 RCOR1Q9UKL0 485 aa18.78■□□□□ 0.6
IFT140-201ENST00000361339 CFAP45Q9UL16 551 aa18.78■□□□□ 0.6
IFT140-201ENST00000361339 B4E1Z4 1266 aa18.78■□□□□ 0.6
IFT140-201ENST00000361339 PDE8BO95263 885 aa18.78■□□□□ 0.6
IFT140-201ENST00000361339 TEX13AQ9BXU3 409 aaPredicted RBP18.78■□□□□ 0.6
IFT140-201ENST00000361339 ORC3Q9UBD5 711 aaPredicted RBP18.78■□□□□ 0.6
IFT140-201ENST00000361339 AKAP11Q9UKA4 1901 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 SMIM22K7EJ46 135 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 EXOC5O00471 708 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 CAPN2P17655 700 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 LRRC8AQ8IWT6 810 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 FSIP1Q8NA03 581 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 PHKBQ93100 1093 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 NOL10Q9BSC4 688 aaKnown RBP18.77■□□□□ 0.6
IFT140-201ENST00000361339 PCDHA7Q9UN72 937 aa18.77■□□□□ 0.6
IFT140-201ENST00000361339 RALYLQ86SE5 291 aaKnown RBP18.77■□□□□ 0.59
IFT140-201ENST00000361339 NEDD4P46934 1319 aa18.76■□□□□ 0.59
IFT140-201ENST00000361339 PDE6AP16499 860 aa18.76■□□□□ 0.59
IFT140-201ENST00000361339 CTDSPL2Q05D32 466 aa18.76■□□□□ 0.59
IFT140-201ENST00000361339 PLA2G4DQ86XP0 818 aa18.76■□□□□ 0.59
IFT140-201ENST00000361339 NCOA7Q8NI08 942 aa18.76■□□□□ 0.59
IFT140-201ENST00000361339 CDHR2Q9BYE9 1310 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms