RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 TAOK3Q9H2K8 898 aa23.92■■□□□ 1.42
SMURF1-201ENST00000361125 PARP1P09874 1014 aaKnown RBP23.91■■□□□ 1.42
SMURF1-201ENST00000361125 GTF2F1P35269 517 aaKnown RBP eCLIP23.91■■□□□ 1.42
SMURF1-201ENST00000361125 RBM28Q9NW13 759 aaKnown RBP23.91■■□□□ 1.42
SMURF1-201ENST00000361125 PHACTR2O75167 634 aa23.91■■□□□ 1.42
SMURF1-201ENST00000361125 ZNF174Q15697 407 aa23.91■■□□□ 1.42
SMURF1-201ENST00000361125 MAATS1Q7Z4T9 603 aa23.91■■□□□ 1.42
SMURF1-201ENST00000361125 TEX11Q8IYF3 940 aa23.91■■□□□ 1.42
SMURF1-201ENST00000361125 HIBADHP31937 336 aaKnown RBP23.91■■□□□ 1.42
SMURF1-201ENST00000361125 RGS22Q8NE09 1264 aa23.91■■□□□ 1.42
SMURF1-201ENST00000361125 JDP2Q8WYK2 163 aa23.9■■□□□ 1.42
SMURF1-201ENST00000361125 BABAM1Q9NWV8 329 aa23.9■■□□□ 1.42
SMURF1-201ENST00000361125 MRVI1Q9Y6F6 885 aa23.9■■□□□ 1.42
SMURF1-201ENST00000361125 CYLC1P35663 651 aaPredicted RBP23.9■■□□□ 1.42
SMURF1-201ENST00000361125 CTR9Q6PD62 1173 aa23.9■■□□□ 1.42
SMURF1-201ENST00000361125 SH3TC1Q8TE82 1336 aa23.9■■□□□ 1.42
SMURF1-201ENST00000361125 BRAPQ7Z569 592 aa23.9■■□□□ 1.42
SMURF1-201ENST00000361125 GPCPD1Q9NPB8 672 aa23.89■■□□□ 1.42
SMURF1-201ENST00000361125 CCDC172P0C7W6 258 aa23.89■■□□□ 1.42
SMURF1-201ENST00000361125 EIF6P56537 245 aaKnown RBP23.89■■□□□ 1.42
SMURF1-201ENST00000361125 UBE4AQ14139 1066 aa23.89■■□□□ 1.42
SMURF1-201ENST00000361125 FAM98CQ17RN3 349 aaKnown RBP23.89■■□□□ 1.42
SMURF1-201ENST00000361125 EHBP1Q8NDI1 1231 aa23.89■■□□□ 1.42
SMURF1-201ENST00000361125 KRT222Q8N1A0 295 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 CCDC97Q96F63 343 aaPredicted RBP23.89■■□□□ 1.41
SMURF1-201ENST00000361125 POLD1P28340 1107 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 PARP10Q53GL7 1025 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 DTHD1Q6ZMT9 781 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 SYNCQ9H7C4 482 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 DNAI1Q9UI46 699 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 FAM13AO94988 1023 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 SPAG1Q07617 926 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 TMEM87AQ8NBN3 555 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 SNX14Q9Y5W7 946 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 KDM6BO15054 1643 aa23.89■■□□□ 1.41
SMURF1-201ENST00000361125 IFI16Q16666 785 aaKnown RBP23.88■■□□□ 1.41
SMURF1-201ENST00000361125 GNA11P29992 359 aa23.88■■□□□ 1.41
SMURF1-201ENST00000361125 KDM5CP41229 1560 aa23.88■■□□□ 1.41
SMURF1-201ENST00000361125 A0A1B0GVL5 298 aa23.87■■□□□ 1.41
SMURF1-201ENST00000361125 VWA3AA6NCI4 1184 aa23.87■■□□□ 1.41
SMURF1-201ENST00000361125 UBXN1Q04323 297 aa23.87■■□□□ 1.41
SMURF1-201ENST00000361125 MAPK8IP2Q13387 824 aaPredicted RBP23.87■■□□□ 1.41
SMURF1-201ENST00000361125 ZNF445P59923 1031 aa23.87■■□□□ 1.41
SMURF1-201ENST00000361125 AKNAD1Q5T1N1 836 aa23.87■■□□□ 1.41
SMURF1-201ENST00000361125 NCOA5Q9HCD5 579 aaKnown RBP23.87■■□□□ 1.41
SMURF1-201ENST00000361125 TRERF1Q96PN7 1200 aa23.87■■□□□ 1.41
SMURF1-201ENST00000361125 PKD2L1Q9P0L9 805 aa23.87■■□□□ 1.41
SMURF1-201ENST00000361125 SP4Q02446 784 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 PTPRTO14522 1441 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 HOXB7P09629 217 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 CTDSPL2Q05D32 466 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 DNAJC10Q8IXB1 793 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 DTNBO60941 627 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 LETM2Q2VYF4 491 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 FAM212AQ96EL1 285 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 CCDC87Q9NVE4 849 aa23.86■■□□□ 1.41
SMURF1-201ENST00000361125 CCDC94Q9BW85 323 aaPredicted RBP23.85■■□□□ 1.41
SMURF1-201ENST00000361125 CDCA7Q9BWT1 371 aaPredicted RBP23.85■■□□□ 1.41
SMURF1-201ENST00000361125 AATFQ9NY61 560 aaKnown RBP eCLIP23.85■■□□□ 1.41
SMURF1-201ENST00000361125 GPAA1O43292 621 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 TTC6Q86TZ1 520 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 TMEM110-MUSTN1A8MSY1 372 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 PRDM1O75626 825 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 GCKRQ14397 625 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 USP37Q86T82 979 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 VTI1AQ96AJ9 217 aa23.85■■□□□ 1.41
SMURF1-201ENST00000361125 ARHGEF10O15013 1369 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 TCHPQ9BT92 498 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 EIF4A1P60842 406 aaKnown RBP23.84■■□□□ 1.41
SMURF1-201ENST00000361125 RNF187Q5TA31 235 aaPredicted RBP23.84■■□□□ 1.41
SMURF1-201ENST00000361125 IFNKQ9P0W0 207 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 GJA3Q9Y6H8 435 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 LMBRD1Q9NUN5 540 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.84■■□□□ 1.41
SMURF1-201ENST00000361125 V9GYY5 206 aaPredicted RBP23.84■■□□□ 1.41
SMURF1-201ENST00000361125 KDM5AP29375 1690 aaKnown RBP23.84■■□□□ 1.41
SMURF1-201ENST00000361125 KIAA0753Q2KHM9 967 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 GGA1Q9UJY5 639 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 KAT6BQ8WYB5 2073 aa23.84■■□□□ 1.41
SMURF1-201ENST00000361125 ZNF496Q96IT1 587 aaPredicted RBP23.83■■□□□ 1.41
SMURF1-201ENST00000361125 GJC1P36383 396 aa23.83■■□□□ 1.41
SMURF1-201ENST00000361125 GOLGA6L10A0A0M3HER8 536 aa23.83■■□□□ 1.4
SMURF1-201ENST00000361125 SLU7O95391 586 aaKnown RBP23.83■■□□□ 1.4
SMURF1-201ENST00000361125 DPH6Q7L8W6 267 aa23.83■■□□□ 1.4
SMURF1-201ENST00000361125 NBPF14Q5TI25 921 aa23.82■■□□□ 1.4
SMURF1-201ENST00000361125 APPBP2Q92624 585 aa23.82■■□□□ 1.4
SMURF1-201ENST00000361125 BICDL2A1A5D9 508 aa23.82■■□□□ 1.4
SMURF1-201ENST00000361125 PIK3AP1Q6ZUJ8 805 aa23.82■■□□□ 1.4
SMURF1-201ENST00000361125 KCNQ3O43525 872 aa23.81■■□□□ 1.4
SMURF1-201ENST00000361125 NF2P35240 595 aa23.81■■□□□ 1.4
SMURF1-201ENST00000361125 SMC1AQ14683 1233 aaKnown RBP23.81■■□□□ 1.4
SMURF1-201ENST00000361125 LMAN1P49257 510 aa23.81■■□□□ 1.4
SMURF1-201ENST00000361125 CKAP4Q07065 602 aaKnown RBP23.81■■□□□ 1.4
SMURF1-201ENST00000361125 MYL10Q9BUA6 226 aa23.81■■□□□ 1.4
SMURF1-201ENST00000361125 MAGI2Q86UL8 1455 aa23.81■■□□□ 1.4
SMURF1-201ENST00000361125 KARSQ15046 597 aaKnown RBP23.81■■□□□ 1.4
SMURF1-201ENST00000361125 CFAP65Q6ZU64 1925 aaKnown RBP23.81■■□□□ 1.4
SMURF1-201ENST00000361125 CTAGE15A4D2H0 777 aa23.81■■□□□ 1.4
SMURF1-201ENST00000361125 CTAGE8P0CG41 777 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms