RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 DZIP1Q86YF9 867 aaKnown RBP26.28■■□□□ 1.8
HOXA4-201ENST00000360046 LSG1Q9H089 658 aaKnown RBP26.28■■□□□ 1.8
HOXA4-201ENST00000360046 PUS7LQ9H0K6 701 aaKnown RBP26.28■■□□□ 1.8
HOXA4-201ENST00000360046 TTLL5Q6EMB2 1281 aa26.28■■□□□ 1.8
HOXA4-201ENST00000360046 NAA16Q6N069 864 aaPredicted RBP26.28■■□□□ 1.8
HOXA4-201ENST00000360046 CYP7A1P22680 504 aa26.27■■□□□ 1.8
HOXA4-201ENST00000360046 MECOMQ03112 1051 aa26.27■■□□□ 1.8
HOXA4-201ENST00000360046 SCN9AQ15858 1988 aa26.26■■□□□ 1.79
HOXA4-201ENST00000360046 YBX3P16989 372 aaKnown RBP eCLIP26.26■■□□□ 1.79
HOXA4-201ENST00000360046 PTH1RQ03431 593 aa26.26■■□□□ 1.79
HOXA4-201ENST00000360046 NIM1KQ8IY84 436 aa26.26■■□□□ 1.79
HOXA4-201ENST00000360046 NSUN4Q96CB9 384 aaKnown RBP26.26■■□□□ 1.79
HOXA4-201ENST00000360046 KCNQ5Q9NR82 932 aa26.26■■□□□ 1.79
HOXA4-201ENST00000360046 LTBP3Q9NS15 1303 aa26.25■■□□□ 1.79
HOXA4-201ENST00000360046 GPAA1O43292 621 aa26.25■■□□□ 1.79
HOXA4-201ENST00000360046 RBM25P49756 843 aaKnown RBP26.25■■□□□ 1.79
HOXA4-201ENST00000360046 GPR162Q16538 588 aa26.25■■□□□ 1.79
HOXA4-201ENST00000360046 JDP2Q8WYK2 163 aa26.25■■□□□ 1.79
HOXA4-201ENST00000360046 AIDAQ96BJ3 306 aa26.25■■□□□ 1.79
HOXA4-201ENST00000360046 EPB41L2O43491 1005 aaKnown RBP26.24■■□□□ 1.79
HOXA4-201ENST00000360046 MCCP23508 829 aa26.24■■□□□ 1.79
HOXA4-201ENST00000360046 GRIK5Q16478 980 aa26.24■■□□□ 1.79
HOXA4-201ENST00000360046 ZNF384Q8TF68 577 aa26.24■■□□□ 1.79
HOXA4-201ENST00000360046 ADGRA1Q86SQ6 560 aa26.23■■□□□ 1.79
HOXA4-201ENST00000360046 COL4A5P29400 1685 aa26.23■■□□□ 1.79
HOXA4-201ENST00000360046 YDJCA8MPS7 323 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 MIGA1Q8NAN2 632 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 USP17L3A6NCW0 530 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 USP17L4A6NCW7 530 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 IGSF3O75054 1194 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 MBD4O95243 580 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 VPS53Q5VIR6 699 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 STRIP1Q5VSL9 837 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 USP17L1Q7RTZ2 530 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 MXD3Q9BW11 206 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 ZNRF3Q9ULT6 936 aa26.22■■□□□ 1.79
HOXA4-201ENST00000360046 GSTO1P78417 241 aa26.21■■□□□ 1.79
HOXA4-201ENST00000360046 TMED8Q6PL24 325 aaPredicted RBP26.21■■□□□ 1.79
HOXA4-201ENST00000360046 ZNF646O15015 1829 aaPredicted RBP26.21■■□□□ 1.79
HOXA4-201ENST00000360046 PRELPP51888 382 aa26.2■■□□□ 1.79
HOXA4-201ENST00000360046 CERS5Q8N5B7 392 aa26.2■■□□□ 1.79
HOXA4-201ENST00000360046 MAP4K1Q92918 833 aa26.2■■□□□ 1.79
HOXA4-201ENST00000360046 ARMT1Q9H993 441 aa26.2■■□□□ 1.79
HOXA4-201ENST00000360046 RBM8AQ9Y5S9 174 aaKnown RBP26.2■■□□□ 1.79
HOXA4-201ENST00000360046 MYH2Q9UKX2 1941 aa26.2■■□□□ 1.78
HOXA4-201ENST00000360046 PSME4Q14997 1843 aa26.2■■□□□ 1.78
HOXA4-201ENST00000360046 MAGEB6P1A0A0J9YX57 407 aa26.19■■□□□ 1.78
HOXA4-201ENST00000360046 RAD17O75943 681 aa26.19■■□□□ 1.78
HOXA4-201ENST00000360046 HSPD1P10809 573 aaKnown RBP26.19■■□□□ 1.78
HOXA4-201ENST00000360046 DIXDC1Q155Q3 683 aa26.19■■□□□ 1.78
HOXA4-201ENST00000360046 DACT2Q5SW24 774 aa26.19■■□□□ 1.78
HOXA4-201ENST00000360046 SUGT1Q9Y2Z0 365 aa26.19■■□□□ 1.78
HOXA4-201ENST00000360046 F8W031 263 aaPredicted RBP26.18■■□□□ 1.78
HOXA4-201ENST00000360046 HSPA4P34932 840 aa26.18■■□□□ 1.78
HOXA4-201ENST00000360046 LCORLQ8N3X6 602 aa26.18■■□□□ 1.78
HOXA4-201ENST00000360046 STRBPQ96SI9 672 aaKnown RBP26.18■■□□□ 1.78
HOXA4-201ENST00000360046 DSCC1Q9BVC3 393 aa26.18■■□□□ 1.78
HOXA4-201ENST00000360046 ANP32AP39687 249 aaKnown RBP26.17■■□□□ 1.78
HOXA4-201ENST00000360046 UTRNP46939 3433 aa26.17■■□□□ 1.78
HOXA4-201ENST00000360046 LDHCP07864 332 aa26.17■■□□□ 1.78
HOXA4-201ENST00000360046 LMNB1P20700 586 aa26.17■■□□□ 1.78
HOXA4-201ENST00000360046 SLF2Q8IX21 1173 aa26.17■■□□□ 1.78
HOXA4-201ENST00000360046 AATFQ9NY61 560 aaKnown RBP eCLIP26.17■■□□□ 1.78
HOXA4-201ENST00000360046 TTF2Q9UNY4 1162 aaKnown RBP26.17■■□□□ 1.78
HOXA4-201ENST00000360046 U3KPZ7 1027 aaPredicted RBP26.17■■□□□ 1.78
HOXA4-201ENST00000360046 FKBP1AP62942 108 aaKnown RBP26.16■■□□□ 1.78
HOXA4-201ENST00000360046 DYNLL1P63167 89 aaKnown RBP26.16■■□□□ 1.78
HOXA4-201ENST00000360046 PALD1Q9ULE6 856 aa26.16■■□□□ 1.78
HOXA4-201ENST00000360046 MROH7-TTC4A0A0A0MT08 1334 aa26.15■■□□□ 1.78
HOXA4-201ENST00000360046 APPP05067 770 aa26.15■■□□□ 1.78
HOXA4-201ENST00000360046 RIOK1Q9BRS2 568 aaKnown RBP26.15■■□□□ 1.78
HOXA4-201ENST00000360046 NOL10Q9BSC4 688 aaKnown RBP26.15■■□□□ 1.78
HOXA4-201ENST00000360046 PSMD14O00487 310 aa26.14■■□□□ 1.78
HOXA4-201ENST00000360046 GNAT2P19087 354 aa26.14■■□□□ 1.78
HOXA4-201ENST00000360046 CXCL9Q07325 125 aa26.14■■□□□ 1.78
HOXA4-201ENST00000360046 FOXP2O15409 715 aa26.14■■□□□ 1.77
HOXA4-201ENST00000360046 NECTIN1Q15223 517 aa26.14■■□□□ 1.77
HOXA4-201ENST00000360046 KIAA0825Q8IV33 1275 aa26.14■■□□□ 1.77
HOXA4-201ENST00000360046 SLC4A4Q9Y6R1 1079 aa26.14■■□□□ 1.77
HOXA4-201ENST00000360046 GRIN3BO60391 1043 aa26.13■■□□□ 1.77
HOXA4-201ENST00000360046 EIF6P56537 245 aaKnown RBP26.13■■□□□ 1.77
HOXA4-201ENST00000360046 RNF20Q5VTR2 975 aa26.13■■□□□ 1.77
HOXA4-201ENST00000360046 CREB3L3Q68CJ9 461 aa26.13■■□□□ 1.77
HOXA4-201ENST00000360046 CIAPIN1Q6FI81 312 aa26.13■■□□□ 1.77
HOXA4-201ENST00000360046 KIF2CQ99661 725 aa26.13■■□□□ 1.77
HOXA4-201ENST00000360046 BAG3O95817 575 aa26.12■■□□□ 1.77
HOXA4-201ENST00000360046 SCNN1DP51172 638 aa26.12■■□□□ 1.77
HOXA4-201ENST00000360046 ANAPC15P60006 121 aa26.12■■□□□ 1.77
HOXA4-201ENST00000360046 SLC27A2O14975 620 aa26.11■■□□□ 1.77
HOXA4-201ENST00000360046 PRKAB2O43741 272 aa26.11■■□□□ 1.77
HOXA4-201ENST00000360046 ZKSCAN1P17029 563 aaPredicted RBP26.11■■□□□ 1.77
HOXA4-201ENST00000360046 RSBN1LQ6PCB5 846 aaPredicted RBP26.11■■□□□ 1.77
HOXA4-201ENST00000360046 RNF181Q9P0P0 153 aa26.11■■□□□ 1.77
HOXA4-201ENST00000360046 PATL2C9JE40 543 aaKnown RBP26.11■■□□□ 1.77
HOXA4-201ENST00000360046 VIL1P09327 827 aaKnown RBP26.11■■□□□ 1.77
HOXA4-201ENST00000360046 BTDP43251 543 aa26.11■■□□□ 1.77
HOXA4-201ENST00000360046 TNIP1Q15025 636 aa26.11■■□□□ 1.77
HOXA4-201ENST00000360046 CTNNA3Q9UI47 895 aa26.11■■□□□ 1.77
HOXA4-201ENST00000360046 SNX14Q9Y5W7 946 aa26.11■■□□□ 1.77
HOXA4-201ENST00000360046 ADAMTSL1Q8N6G6 1762 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms