RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 MECOMQ03112 1051 aa27.67■■■□□ 2.02
SDF4-202ENST00000360001 NAA16Q6N069 864 aaPredicted RBP27.67■■■□□ 2.02
SDF4-202ENST00000360001 COA1Q9GZY4 146 aa27.67■■■□□ 2.02
SDF4-202ENST00000360001 FGAP02671 866 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 SPTY2D1Q68D10 685 aaPredicted RBP27.66■■■□□ 2.02
SDF4-202ENST00000360001 TTC14Q96N46 770 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 ARMT1Q9H993 441 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 KIAA1551Q9HCM1 1747 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 CHD4Q14839 1912 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 CPA1P15085 419 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 TTLL5Q6EMB2 1281 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 LCORLQ8N3X6 602 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 MIGA1Q8NAN2 632 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 CTNNA3Q9UI47 895 aa27.66■■■□□ 2.02
SDF4-202ENST00000360001 KRT32Q14532 448 aa27.65■■■□□ 2.02
SDF4-202ENST00000360001 TTLL6Q8N841 843 aa27.65■■■□□ 2.02
SDF4-202ENST00000360001 EYA3Q99504 573 aa27.65■■■□□ 2.02
SDF4-202ENST00000360001 RTFDC1Q9BY42 306 aaPredicted RBP27.65■■■□□ 2.02
SDF4-202ENST00000360001 CC2D2BQ6DHV5 1058 aa27.64■■■□□ 2.02
SDF4-202ENST00000360001 SGIP1Q9BQI5 828 aa27.64■■■□□ 2.02
SDF4-202ENST00000360001 PSDA5PKW4 1024 aaPredicted RBP27.64■■■□□ 2.01
SDF4-202ENST00000360001 IGSF3O75054 1194 aa27.64■■■□□ 2.01
SDF4-202ENST00000360001 PSMA5P28066 241 aa27.64■■■□□ 2.01
SDF4-202ENST00000360001 COL9A3Q14050 684 aaPredicted RBP27.64■■■□□ 2.01
SDF4-202ENST00000360001 TMED8Q6PL24 325 aaPredicted RBP27.64■■■□□ 2.01
SDF4-202ENST00000360001 RUFY3Q7L099 469 aa27.64■■■□□ 2.01
SDF4-202ENST00000360001 CYP46A1Q9Y6A2 500 aa27.64■■■□□ 2.01
SDF4-202ENST00000360001 MCM2P49736 904 aa27.63■■■□□ 2.01
SDF4-202ENST00000360001 FAM205AQ6ZU69 1335 aa27.63■■■□□ 2.01
SDF4-202ENST00000360001 PATL2C9JE40 543 aaKnown RBP27.62■■■□□ 2.01
SDF4-202ENST00000360001 LDHBP07195 334 aaKnown RBP27.62■■■□□ 2.01
SDF4-202ENST00000360001 GRIK5Q16478 980 aa27.62■■■□□ 2.01
SDF4-202ENST00000360001 STOX1Q6ZVD7 989 aa27.62■■■□□ 2.01
SDF4-202ENST00000360001 SPRYD3Q8NCJ5 442 aa27.62■■■□□ 2.01
SDF4-202ENST00000360001 RIOK1Q9BRS2 568 aaKnown RBP27.62■■■□□ 2.01
SDF4-202ENST00000360001 MAGEB6P1A0A0J9YX57 407 aa27.62■■■□□ 2.01
SDF4-202ENST00000360001 GNAT2P19087 354 aa27.62■■■□□ 2.01
SDF4-202ENST00000360001 TGFB2P61812 414 aa27.62■■■□□ 2.01
SDF4-202ENST00000360001 C21orf2O43822 256 aa27.61■■■□□ 2.01
SDF4-202ENST00000360001 ALX1Q15699 326 aa27.61■■■□□ 2.01
SDF4-202ENST00000360001 DZIP1Q86YF9 867 aaKnown RBP27.61■■■□□ 2.01
SDF4-202ENST00000360001 EPB41L4AQ9HCS5 686 aaPredicted RBP27.61■■■□□ 2.01
SDF4-202ENST00000360001 GSG1L2A8MUP6 293 aa27.6■■■□□ 2.01
SDF4-202ENST00000360001 APPP05067 770 aa27.6■■■□□ 2.01
SDF4-202ENST00000360001 ZMYM6O95789 1325 aa27.6■■■□□ 2.01
SDF4-202ENST00000360001 PRKAB2O43741 272 aa27.6■■■□□ 2.01
SDF4-202ENST00000360001 IMMTQ16891 758 aaKnown RBP27.6■■■□□ 2.01
SDF4-202ENST00000360001 DOK7Q18PE1 504 aa27.6■■■□□ 2.01
SDF4-202ENST00000360001 BLOC1S2Q6QNY1 142 aa27.6■■■□□ 2.01
SDF4-202ENST00000360001 PDRG1Q9NUG6 133 aa27.6■■■□□ 2.01
SDF4-202ENST00000360001 IFNL3Q8IZI9 196 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 TBC1D22AQ8WUA7 517 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 NEK1Q96PY6 1258 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 SLC4A4Q9Y6R1 1079 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 LAMA4Q16363 1823 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 RPS6KB1P23443 525 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 AK2P54819 239 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 DYNLL1P63167 89 aaKnown RBP27.59■■■□□ 2.01
SDF4-202ENST00000360001 GTF2IP78347 998 aa27.59■■■□□ 2.01
SDF4-202ENST00000360001 SLKQ9H2G2 1235 aaPredicted RBP27.59■■■□□ 2.01
SDF4-202ENST00000360001 E7EWF7 191 aa27.58■■■□□ 2.01
SDF4-202ENST00000360001 HAND2P61296 217 aa27.58■■■□□ 2.01
SDF4-202ENST00000360001 MFSD14BQ5SR56 506 aa27.58■■■□□ 2.01
SDF4-202ENST00000360001 PTGER2P43116 358 aa27.57■■■□□ 2
SDF4-202ENST00000360001 TMX3Q96JJ7 454 aa27.57■■■□□ 2
SDF4-202ENST00000360001 GRIPAP1Q4V328 841 aa27.57■■■□□ 2
SDF4-202ENST00000360001 NOL8Q76FK4 1167 aaKnown RBP27.57■■■□□ 2
SDF4-202ENST00000360001 ZNF213O14771 459 aa27.56■■■□□ 2
SDF4-202ENST00000360001 CCDC93Q567U6 631 aa27.56■■■□□ 2
SDF4-202ENST00000360001 GOLGB1Q14789 3259 aaKnown RBP27.56■■■□□ 2
SDF4-202ENST00000360001 NBPF3Q9H094 633 aa27.55■■■□□ 2
SDF4-202ENST00000360001 NAPBQ9H115 298 aa27.55■■■□□ 2
SDF4-202ENST00000360001 G3V3G9 751 aa27.55■■■□□ 2
SDF4-202ENST00000360001 BRCA1P38398 1863 aaKnown RBP27.55■■■□□ 2
SDF4-202ENST00000360001 GSTO1P78417 241 aa27.55■■■□□ 2
SDF4-202ENST00000360001 DCAF8Q5TAQ9 597 aa27.55■■■□□ 2
SDF4-202ENST00000360001 PODNQ7Z5L7 613 aa27.55■■■□□ 2
SDF4-202ENST00000360001 SUPT20HQ8NEM7 779 aa27.55■■■□□ 2
SDF4-202ENST00000360001 NACAP1Q9BZK3 213 aa27.55■■■□□ 2
SDF4-202ENST00000360001 DBNDD1Q9H9R9 158 aa27.55■■■□□ 2
SDF4-202ENST00000360001 AATFQ9NY61 560 aaKnown RBP eCLIP27.55■■■□□ 26e-8■■■■■ 44.5
SDF4-202ENST00000360001 PIM2Q9P1W9 311 aa27.55■■■□□ 2
SDF4-202ENST00000360001 MYH2Q9UKX2 1941 aa27.54■■■□□ 2
SDF4-202ENST00000360001 KIAA2012Q0VF49 1180 aa27.54■■■□□ 2
SDF4-202ENST00000360001 DIXDC1Q155Q3 683 aa27.54■■■□□ 2
SDF4-202ENST00000360001 SDR42E1Q8WUS8 393 aa27.54■■■□□ 2
SDF4-202ENST00000360001 ALDH8A1Q9H2A2 487 aaPredicted RBP27.54■■■□□ 2
SDF4-202ENST00000360001 HSP90AA1P07900 732 aaKnown RBP27.53■■■□□ 2
SDF4-202ENST00000360001 HMGB1P09429 215 aaKnown RBP27.53■■■□□ 2
SDF4-202ENST00000360001 RTKN2Q8IZC4 609 aa27.53■■■□□ 2
SDF4-202ENST00000360001 TCEANC2Q96MN5 208 aa27.53■■■□□ 2
SDF4-202ENST00000360001 AOC3Q16853 763 aa27.53■■■□□ 2
SDF4-202ENST00000360001 FOXD4L1Q9NU39 408 aa27.53■■■□□ 2
SDF4-202ENST00000360001 CD2APQ9Y5K6 639 aa27.53■■■□□ 2
SDF4-202ENST00000360001 DDIT3P35638 169 aa27.52■■■□□ 2
SDF4-202ENST00000360001 CERS5Q8N5B7 392 aa27.52■■■□□ 2
SDF4-202ENST00000360001 LIMCH1Q9UPQ0 1083 aa27.52■■■□□ 2
SDF4-202ENST00000360001 ECE2O60344 883 aa27.51■■■□□ 2
SDF4-202ENST00000360001 TDO2P48775 406 aa27.51■■■□□ 2
SDF4-202ENST00000360001 FBXW7Q969H0 707 aa27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms