RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 TUBB2AQ13885 445 aa16.98■□□□□ 0.31
APAF1-203ENST00000359972 TUBB2BQ9BVA1 445 aa16.98■□□□□ 0.31
APAF1-203ENST00000359972 PCDHB15Q9Y5E8 787 aa16.98■□□□□ 0.31
APAF1-203ENST00000359972 PPP1R9AQ9ULJ8 1098 aa16.98■□□□□ 0.31
APAF1-203ENST00000359972 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 ARHGAP42A6NI28 874 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 SMARCC2Q8TAQ2 1214 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 PIK3R5Q8WYR1 880 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 AKNAD1Q5T1N1 836 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 CHST3Q7LGC8 479 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 FANCCQ00597 558 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 INF2Q27J81 1249 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
APAF1-203ENST00000359972 MGEA5O60502 916 aa16.97■□□□□ 0.31
APAF1-203ENST00000359972 MRPL46Q9H2W6 279 aaKnown RBP16.97■□□□□ 0.31
APAF1-203ENST00000359972 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 RILPQ96NA2 401 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 ZBTB43O43298 467 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 ACTN4O43707 911 aaKnown RBP16.96■□□□□ 0.31
APAF1-203ENST00000359972 WDR78Q5VTH9 848 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.96■□□□□ 0.31
APAF1-203ENST00000359972 TRPC3Q13507 836 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 CCT6BQ92526 530 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.31
APAF1-203ENST00000359972 ESCO1Q5FWF5 840 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 PHLDB3Q6NSJ2 640 aa16.96■□□□□ 0.31
APAF1-203ENST00000359972 RASSF2P50749 326 aa16.96■□□□□ 0.3
APAF1-203ENST00000359972 RASA3Q14644 834 aa16.96■□□□□ 0.3
APAF1-203ENST00000359972 PPFIA4O75335 1185 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 ATICP31939 592 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 PAK2Q13177 524 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 PLCB1Q9NQ66 1216 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 LRRC9Q6ZRR7 1453 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 SEC31AO94979 1220 aaKnown RBP16.95■□□□□ 0.3
APAF1-203ENST00000359972 FAM13AO94988 1023 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 EHMT1Q9H9B1 1298 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 PDE11AQ9HCR9 933 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 WTAPQ15007 396 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
APAF1-203ENST00000359972 HEATR3Q7Z4Q2 680 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 GOLGA8KD6RF30 607 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 KRT71Q3SY84 523 aa16.95■□□□□ 0.3
APAF1-203ENST00000359972 NAA16Q6N069 864 aaPredicted RBP16.95■□□□□ 0.3
APAF1-203ENST00000359972 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 JRKLQ9Y4A0 524 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 GADD45BO75293 160 aaPredicted RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 SH3BGRP55822 239 aaPredicted RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 PDCD7Q8N8D1 485 aaKnown RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 FAM170AA1A519 330 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 BRD2P25440 801 aaKnown RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 SNX16P57768 344 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 APOBRQ0VD83 1088 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 KLHDC4Q8TBB5 520 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 MAK16Q9BXY0 300 aaKnown RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 I3L4J1 428 aa16.94■□□□□ 0.3
APAF1-203ENST00000359972 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 NOC4LQ9BVI4 516 aaKnown RBP16.94■□□□□ 0.3
APAF1-203ENST00000359972 MTX1Q13505 466 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 RTN1Q16799 776 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 ANKRD20A3Q5VUR7 823 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
APAF1-203ENST00000359972 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 CEP104O60308 925 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 DENND2CQ68D51 928 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 SPOPO43791 374 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 EFCC1Q9HA90 598 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 AGTPBP1Q9UPW5 1226 aa16.93■□□□□ 0.3
APAF1-203ENST00000359972 ITIH3Q06033 890 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 PLS1Q14651 629 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 SLC5A1P13866 664 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 KRT15P19012 456 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 STX2P32856 288 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 ZNF445P59923 1031 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 BRD3Q15059 726 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 NBPF7P0C2Y1 421 aaPredicted RBP16.92■□□□□ 0.3
APAF1-203ENST00000359972 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 RNF40O75150 1001 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 PPFIA2O75334 1257 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 CTNNA1P35221 906 aaKnown RBP16.92■□□□□ 0.3
APAF1-203ENST00000359972 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 EFCAB13Q8IY85 973 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
APAF1-203ENST00000359972 KIF21BO75037 1637 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 ATF3P18847 181 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 CCDC14Q49A88 953 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 NOX5Q96PH1 765 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 VCX3AQ9NNX9 186 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 WIZO95785 1651 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 IFT88Q13099 833 aa16.92■□□□□ 0.3
APAF1-203ENST00000359972 PDE1AP54750 535 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
APAF1-203ENST00000359972 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 BMP15O95972 392 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms