RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 SHTN1A0MZ66 631 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 USP17L3A6NCW0 530 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 USP17L4A6NCW7 530 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 E7EWF7 191 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 NTSR2O95665 410 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 HIBADHP31937 336 aaKnown RBP7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 PUM3Q15397 648 aaKnown RBP7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 TMEM67Q5HYA8 995 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 MFSD14BQ5SR56 506 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 RNF20Q5VTR2 975 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 USP17L1Q7RTZ2 530 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 TBC1D10CQ8IV04 446 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 DHX37Q8IY37 1157 aaKnown RBP7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 RASGRP4Q8TDF6 673 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 HDAC5Q9UQL6 1122 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 JCADQ9P266 1359 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 PTMAP06454 111 aaKnown RBP7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 GPSM2P81274 684 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 SMARCC1Q92922 1105 aaPredicted RBP7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 GBP4Q96PP9 640 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 AKAP2Q9Y2D5 859 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 CARMIL3Q8ND23 1372 aa7.38□□□□□ -1.23
CX3CR1-201ENST00000358309 MKRN3Q13064 507 aaKnown RBP7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 AOC3Q16853 763 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 USP48Q86UV5 1035 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 ZC3H12CQ9C0D7 883 aaKnown RBP7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 MKNK2Q9HBH9 465 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 LIMCH1Q9UPQ0 1083 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 ZDHHC9Q9Y397 364 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 TCP10L2B9ZVM9 353 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 GYS1P13807 737 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 VEGFAP15692 232 aaPredicted RBP7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 ATP5JP18859 108 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 IMMTQ16891 758 aaKnown RBP7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 SLC30A10Q6XR72 485 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 UBA5Q9GZZ9 404 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 PARP3Q9Y6F1 533 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 RAD50Q92878 1312 aa7.37□□□□□ -1.23
CX3CR1-201ENST00000358309 TSPY2A6NKD2 308 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 HSPA4P34932 840 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 ME1P48163 572 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 RBM25P49756 843 aaKnown RBP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 CHMP4BP1P59074 171 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 CYB5R4Q7L1T6 521 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 C2CD5Q86YS7 1000 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 ZNF34Q8IZ26 560 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 C17orf53Q8N3J3 647 aaPredicted RBP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 FAM84BQ96KN1 310 aaPredicted RBP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 HAUS7Q99871 368 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 BCL9O00512 1426 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 ZNF609O15014 1411 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 FRMPD2Q68DX3 1309 aaPredicted RBP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 GOLGA6L3A6NEY3 463 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 LRRC47Q8N1G4 583 aaKnown RBP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 RASSF8Q8NHQ8 419 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 GJA10Q969M2 543 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 CPDO75976 1380 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 ZNF804BA4D1E1 1349 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 MAGEB6P1A0A0J9YX57 407 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 STX6O43752 255 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 RPS6KA4O75676 772 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 GDF11O95390 407 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 ST5P78524 1137 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 MECOMQ03112 1051 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 SCRN1Q12765 414 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 DGKZQ13574 1117 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 NOM1Q5C9Z4 860 aaKnown RBP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 CDAN1Q8IWY9 1227 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 LPIN2Q92539 896 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 GPKOWQ92917 476 aaPredicted RBP eCLIP7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 UBAC1Q9BSL1 405 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 ZNF408Q9H9D4 720 aa7.36□□□□□ -1.23
CX3CR1-201ENST00000358309 NEDD4P46934 1319 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 PTPDC1A2A3K4 754 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 FAM205CA6NFA0 338 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 IBSPP21815 317 aaPredicted RBP7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 GUCY1A2P33402 732 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 SLC16A2P36021 539 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 RAB3GAP1Q15042 981 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 DPP8Q6V1X1 898 aaPredicted RBP7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 SH3RF3Q8TEJ3 882 aaPredicted RBP7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 PKD2L1Q9P0L9 805 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 ORC3Q9UBD5 711 aaPredicted RBP7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 TTF2Q9UNY4 1162 aaKnown RBP7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 A0A0U1RQG5 324 aaPredicted RBP7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 CASP1P29466 404 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 TBC1D10BQ4KMP7 808 aaPredicted RBP7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 DNAJC25Q9H1X3 360 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 GPCPD1Q9NPB8 672 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 POLLQ9UGP5 575 aa7.35□□□□□ -1.23
CX3CR1-201ENST00000358309 CCDC69A6NI79 296 aa7.34□□□□□ -1.23
CX3CR1-201ENST00000358309 PEX10O60683 326 aa7.34□□□□□ -1.23
CX3CR1-201ENST00000358309 AAMPQ13685 434 aa7.34□□□□□ -1.23
CX3CR1-201ENST00000358309 MFSD6Q6ZSS7 791 aa7.34□□□□□ -1.23
CX3CR1-201ENST00000358309 VPS54Q9P1Q0 977 aa7.34□□□□□ -1.23
CX3CR1-201ENST00000358309 ZSWIM5Q9P217 1185 aa7.34□□□□□ -1.23
CX3CR1-201ENST00000358309 STAP2Q9UGK3 403 aa7.34□□□□□ -1.23
CX3CR1-201ENST00000358309 NARFQ9UHQ1 456 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms