RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PSMD6Q15008 389 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 CLUL1Q15846 466 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 GTF3C6Q969F1 213 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 GOLGA6CA6NDK9 693 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 BUB1BO60566 1050 aaPredicted RBP12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 GOLGA6DP0CG33 693 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 GOLGA6AQ9NYA3 693 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 BRD3Q15059 726 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 WAPLQ7Z5K2 1190 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 RBBP5Q15291 538 aaKnown RBP12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 PHLDB2Q86SQ0 1253 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 TACC3Q9Y6A5 838 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 MCM7P33993 719 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 PPP1R2P41236 205 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 AOPEPQ8N6M6 819 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 DHX58Q96C10 678 aa12.9□□□□□ -0.34
SPTBN1-202ENST00000356805 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.9□□□□□ -0.343e-7■■□□□ 13.5
SPTBN1-202ENST00000356805 ZSCAN26Q16670 478 aa12.9□□□□□ -0.35
SPTBN1-202ENST00000356805 SKAP1Q86WV1 359 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 ATP8B1O43520 1251 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 GBP7Q8N8V2 638 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 DBF4Q9UBU7 674 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 HARSP12081 509 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 BANK1Q8NDB2 785 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 CLSTN2Q9H4D0 955 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 RTL1A6NKG5 1358 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 RAD50Q92878 1312 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 RHOXF2BP0C7M4 288 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 LRCH2Q5VUJ6 765 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 CCDC42Q96M95 316 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 RHOXF2Q9BQY4 288 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 INF2Q27J81 1249 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 INTS8Q75QN2 995 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 ZGPATQ8N5A5 531 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 FAM135AQ9P2D6 1515 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 CAMSAP2Q08AD1 1489 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 DAPK3O43293 454 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 RASSF2P50749 326 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 RAPGEF1Q13905 1077 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 SYT10Q6XYQ8 523 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 GOLGA5Q8TBA6 731 aa12.89□□□□□ -0.35
SPTBN1-202ENST00000356805 BICDL2A1A5D9 508 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 BRAPQ7Z569 592 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 PLIN2Q99541 437 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 DNAJC25Q9H1X3 360 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 MAP7Q14244 749 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 LZTFL1Q9NQ48 299 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 ESR2Q92731 530 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 PKD2L1Q9P0L9 805 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 NKIRAS1Q9NYS0 192 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 FRMD4BQ9Y2L6 1034 aa12.88□□□□□ -0.35
SPTBN1-202ENST00000356805 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 GKAP1Q5VSY0 366 aaPredicted RBP12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 CCDC26Q8TAB7 109 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 BAG1Q99933 345 aaPredicted RBP12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 VIMP08670 466 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 SEL1L2Q5TEA6 688 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 B4DLN1 442 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 BACH1O14867 736 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 MRPL12P52815 198 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 ITIH3Q06033 890 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 CACYBPQ9HB71 228 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 KRT2P35908 639 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 GIPC1O14908 333 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 ZBTB17Q13105 803 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 ERCC6LQ2NKX8 1250 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 Q6ZUG5 572 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 POGZQ7Z3K3 1410 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 ARHGAP6O43182 974 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 ZNF853P0CG23 659 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 NAPGQ99747 312 aaPredicted RBP12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 NUF2Q9BZD4 464 aa12.87□□□□□ -0.35
SPTBN1-202ENST00000356805 IFT20Q8IY31 132 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 NACA2Q9H009 215 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 RPRD2Q5VT52 1461 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 PRXQ9BXM0 1461 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 ZNF569Q5MCW4 686 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 IQCDQ96DY2 449 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 CNNM2Q9H8M5 875 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 SPATS2LQ9NUQ6 558 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms