RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DOK7Q18PE1 504 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 RASEFQ8IZ41 740 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 KCNB2Q92953 911 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
CTSA-202ENST00000354880 FAM205AQ6ZU69 1335 aa18.66■□□□□ 0.58
CTSA-202ENST00000354880 LDHBP07195 334 aaKnown RBP18.66■□□□□ 0.58
CTSA-202ENST00000354880 BECN1Q14457 450 aa18.66■□□□□ 0.58
CTSA-202ENST00000354880 DALRD3Q5D0E6 543 aaKnown RBP18.66■□□□□ 0.58
CTSA-202ENST00000354880 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
CTSA-202ENST00000354880 ZNF384Q8TF68 577 aa18.66■□□□□ 0.58
CTSA-202ENST00000354880 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
CTSA-202ENST00000354880 SLC27A2O14975 620 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 MBD4O95243 580 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 PODNQ7Z5L7 613 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 DZIP1Q86YF9 867 aaKnown RBP18.65■□□□□ 0.58
CTSA-202ENST00000354880 STRBPQ96SI9 672 aaKnown RBP18.65■□□□□ 0.58
CTSA-202ENST00000354880 PSMD1Q99460 953 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 FOXP2O15409 715 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 GTF2IP78347 998 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 MFSD14BQ5SR56 506 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 ADGRA1Q86SQ6 560 aa18.65■□□□□ 0.58
CTSA-202ENST00000354880 MIGA1Q8NAN2 632 aa18.64■□□□□ 0.57
CTSA-202ENST00000354880 SNX21Q969T3 373 aa18.64■□□□□ 0.57
CTSA-202ENST00000354880 ARMT1Q9H993 441 aa18.64■□□□□ 0.57
CTSA-202ENST00000354880 DBNDD1Q9H9R9 158 aa18.64■□□□□ 0.57
CTSA-202ENST00000354880 SRCAPQ6ZRS2 3230 aa18.64■□□□□ 0.57
CTSA-202ENST00000354880 AOC3Q16853 763 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 TBC1D2Q9BYX2 928 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 DAXXQ9UER7 740 aaPredicted RBP18.63■□□□□ 0.57
CTSA-202ENST00000354880 MAGEB6P1A0A0J9YX57 407 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 GNAT2P19087 354 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 TSGA10IPQ3SY00 556 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 TTLL5Q6EMB2 1281 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 LCORLQ8N3X6 602 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 CTNNA3Q9UI47 895 aa18.63■□□□□ 0.57
CTSA-202ENST00000354880 PPIP5K2O43314 1243 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 ST18O60284 1047 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 ECE2O60344 883 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 FGAP02671 866 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 CYP21A2P08686 494 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 NEK4P51957 841 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 GRIK5Q16478 980 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 HSCBQ8IWL3 235 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 FBXW7Q969H0 707 aa18.62■□□□□ 0.57
CTSA-202ENST00000354880 RIOK1Q9BRS2 568 aaKnown RBP18.62■□□□□ 0.57
CTSA-202ENST00000354880 PATL2C9JE40 543 aaKnown RBP18.61■□□□□ 0.57
CTSA-202ENST00000354880 APPP05067 770 aa18.61■□□□□ 0.57
CTSA-202ENST00000354880 GSTO1P78417 241 aa18.61■□□□□ 0.57
CTSA-202ENST00000354880 ADCK5Q3MIX3 580 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 IL27Q8NEV9 243 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 JAKMIP1Q96N16 626 aaKnown RBP18.6■□□□□ 0.57
CTSA-202ENST00000354880 UPF3BQ9BZI7 483 aaKnown RBP18.6■□□□□ 0.57
CTSA-202ENST00000354880 TM6SF1Q9BZW5 370 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 SUGT1Q9Y2Z0 365 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 CD2BP2O95400 341 aaKnown RBP18.6■□□□□ 0.57
CTSA-202ENST00000354880 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 KRT32Q14532 448 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 VPS33BQ9H267 617 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 TAF6LQ9Y6J9 622 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 SLC4A4Q9Y6R1 1079 aa18.6■□□□□ 0.57
CTSA-202ENST00000354880 LDHCP07864 332 aa18.59■□□□□ 0.57
CTSA-202ENST00000354880 CASTP20810 708 aaKnown RBP18.59■□□□□ 0.57
CTSA-202ENST00000354880 PSMA5P28066 241 aa18.59■□□□□ 0.57
CTSA-202ENST00000354880 DYNLL1P63167 89 aaKnown RBP18.59■□□□□ 0.57
CTSA-202ENST00000354880 ALX1Q15699 326 aa18.59■□□□□ 0.57
CTSA-202ENST00000354880 IMMTQ16891 758 aaKnown RBP18.59■□□□□ 0.57
CTSA-202ENST00000354880 NLGN2Q8NFZ4 835 aa18.59■□□□□ 0.57
CTSA-202ENST00000354880 AATFQ9NY61 560 aaKnown RBP eCLIP18.59■□□□□ 0.57
CTSA-202ENST00000354880 BCS1LQ9Y276 419 aa18.59■□□□□ 0.57
CTSA-202ENST00000354880 MYH2Q9UKX2 1941 aa18.59■□□□□ 0.57
CTSA-202ENST00000354880 SCN9AQ15858 1988 aa18.59■□□□□ 0.57
CTSA-202ENST00000354880 RPAP1Q9BWH6 1393 aaPredicted RBP18.59■□□□□ 0.57
CTSA-202ENST00000354880 GSG1L2A8MUP6 293 aa18.58■□□□□ 0.57
CTSA-202ENST00000354880 DIXDC1Q155Q3 683 aa18.58■□□□□ 0.57
CTSA-202ENST00000354880 STRIP1Q5VSL9 837 aa18.58■□□□□ 0.57
CTSA-202ENST00000354880 IFNL3Q8IZI9 196 aa18.58■□□□□ 0.57
CTSA-202ENST00000354880 CERS5Q8N5B7 392 aa18.58■□□□□ 0.57
CTSA-202ENST00000354880 KCNQ5Q9NR82 932 aa18.58■□□□□ 0.57
CTSA-202ENST00000354880 ZNF277Q9NRM2 450 aaPredicted RBP18.58■□□□□ 0.57
CTSA-202ENST00000354880 ZMYM6O95789 1325 aa18.58■□□□□ 0.57
CTSA-202ENST00000354880 UTRNP46939 3433 aa18.58■□□□□ 0.56
CTSA-202ENST00000354880 PRKAB2O43741 272 aa18.58■□□□□ 0.56
CTSA-202ENST00000354880 SLF2Q8IX21 1173 aa18.58■□□□□ 0.56
CTSA-202ENST00000354880 NACAP1Q9BZK3 213 aa18.58■□□□□ 0.56
CTSA-202ENST00000354880 ZSWIM6Q9HCJ5 1215 aa18.58■□□□□ 0.56
CTSA-202ENST00000354880 EPB41L4AQ9HCS5 686 aaPredicted RBP18.58■□□□□ 0.56
CTSA-202ENST00000354880 FER1L6Q2WGJ9 1857 aa18.58■□□□□ 0.56
CTSA-202ENST00000354880 MROH7-TTC4A0A0A0MT08 1334 aa18.57■□□□□ 0.56
CTSA-202ENST00000354880 USP17L3A6NCW0 530 aa18.57■□□□□ 0.56
CTSA-202ENST00000354880 USP17L4A6NCW7 530 aa18.57■□□□□ 0.56
CTSA-202ENST00000354880 USP17L1Q7RTZ2 530 aa18.57■□□□□ 0.56
CTSA-202ENST00000354880 LARGE2Q8N3Y3 721 aa18.57■□□□□ 0.56
CTSA-202ENST00000354880 NAPBQ9H115 298 aa18.57■□□□□ 0.56
CTSA-202ENST00000354880 CYP46A1Q9Y6A2 500 aa18.57■□□□□ 0.56
CTSA-202ENST00000354880 ZNF213O14771 459 aa18.56■□□□□ 0.56
CTSA-202ENST00000354880 BAG3O95817 575 aa18.56■□□□□ 0.56
CTSA-202ENST00000354880 FKBP1AP62942 108 aaKnown RBP18.56■□□□□ 0.56
CTSA-202ENST00000354880 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms