RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
PTPN11-201ENST00000351677 KRT79Q5XKE5 535 aa18.16■□□□□ 0.5
PTPN11-201ENST00000351677 ELP1O95163 1332 aa18.16■□□□□ 0.5
PTPN11-201ENST00000351677 UBE4AQ14139 1066 aa18.16■□□□□ 0.5
PTPN11-201ENST00000351677 GUCA1BQ9UMX6 200 aa18.16■□□□□ 0.5
PTPN11-201ENST00000351677 GPAA1O43292 621 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 HSF2BPO75031 334 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 CAPZA3Q96KX2 299 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 GOLGA6L10A0A0M3HER8 536 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
PTPN11-201ENST00000351677 SAP30BPQ9UHR5 308 aaKnown RBP18.15■□□□□ 0.5
PTPN11-201ENST00000351677 GCKRQ14397 625 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 ATL3Q6DD88 541 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 GCC2Q8IWJ2 1684 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
PTPN11-201ENST00000351677 FERMT2Q96AC1 680 aa18.15■□□□□ 0.5
PTPN11-201ENST00000351677 SAMD9Q5K651 1589 aa18.14■□□□□ 0.5
PTPN11-201ENST00000351677 MYL5Q02045 173 aa18.14■□□□□ 0.5
PTPN11-201ENST00000351677 IQUBQ8NA54 791 aa18.14■□□□□ 0.5
PTPN11-201ENST00000351677 ZC3H12CQ9C0D7 883 aaKnown RBP18.14■□□□□ 0.5
PTPN11-201ENST00000351677 TACC1O75410 805 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 APPBP2Q92624 585 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
PTPN11-201ENST00000351677 PUM3Q15397 648 aaKnown RBP18.14■□□□□ 0.49
PTPN11-201ENST00000351677 ZNF569Q5MCW4 686 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 ANO1Q5XXA6 986 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 KIAA0753Q2KHM9 967 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 RBM28Q9NW13 759 aaKnown RBP18.14■□□□□ 0.49
PTPN11-201ENST00000351677 INSRP06213 1382 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
PTPN11-201ENST00000351677 MICALCLQ6ZW33 695 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 CCDC42Q96M95 316 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.49
PTPN11-201ENST00000351677 KDM5AP29375 1690 aaKnown RBP18.13■□□□□ 0.49
PTPN11-201ENST00000351677 SPATA31E1Q6ZUB1 1445 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 CCDC172P0C7W6 258 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 KIF5AQ12840 1032 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 KBTBD3Q8NAB2 608 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 DNAI2Q9GZS0 605 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 ABCC4O15439 1325 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 TAF5LO75529 589 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 CCT6AP40227 531 aaKnown RBP18.13■□□□□ 0.49
PTPN11-201ENST00000351677 CEP112Q8N8E3 955 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 GOLGA1Q92805 767 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 EDC3Q96F86 508 aaKnown RBP18.13■□□□□ 0.49
PTPN11-201ENST00000351677 KRT13P13646 458 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 HSPA4P34932 840 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 KRT83P78385 493 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 DDX17Q92841 729 aaKnown RBP18.13■□□□□ 0.49
PTPN11-201ENST00000351677 MYL10Q9BUA6 226 aa18.13■□□□□ 0.49
PTPN11-201ENST00000351677 SPDYE3A6NKU9 549 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 JAK2O60674 1132 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 ANGEL1Q9UNK9 670 aaKnown RBP18.12■□□□□ 0.49
PTPN11-201ENST00000351677 LLPHQ9BRT6 129 aaKnown RBP18.12■□□□□ 0.49
PTPN11-201ENST00000351677 RRAGDQ9NQL2 400 aaPredicted RBP18.12■□□□□ 0.49
PTPN11-201ENST00000351677 LMBRD1Q9NUN5 540 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 ADGBQ8N7X0 1667 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 BICDL2A1A5D9 508 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 GNA11P29992 359 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 TMEM87BQ96K49 555 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 CLSTN2Q9H4D0 955 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 DENND2AQ9ULE3 1009 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 KCNQ3O43525 872 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 KRT86O43790 486 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 PRDM1O75626 825 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 PLCG2P16885 1265 aa18.12■□□□□ 0.49
PTPN11-201ENST00000351677 LEO1Q8WVC0 666 aaPredicted RBP18.12■□□□□ 0.49
PTPN11-201ENST00000351677 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
PTPN11-201ENST00000351677 SRRTQ9BXP5 876 aaKnown RBP18.12■□□□□ 0.49
PTPN11-201ENST00000351677 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 LETM2Q2VYF4 491 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 CTNND2Q9UQB3 1225 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 ARHGEF10O15013 1369 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 WWC3Q9ULE0 1092 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 GNPATO15228 680 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 OGFOD1Q8N543 542 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 RGS22Q8NE09 1264 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 SH3TC1Q8TE82 1336 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 MAGI2Q86UL8 1455 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 PDE8AO60658 829 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 CTDSPL2Q05D32 466 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 MRVI1Q9Y6F6 885 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 ATP10AO60312 1499 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 C17orf53Q8N3J3 647 aaPredicted RBP18.11■□□□□ 0.49
PTPN11-201ENST00000351677 VEZTQ9HBM0 779 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 KCNH3Q9ULD8 1083 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 PLXNC1O60486 1568 aa18.11■□□□□ 0.49
PTPN11-201ENST00000351677 DEXIO95424 95 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 NEK11Q8NG66 645 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 PHKBQ93100 1093 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 CBX8Q9HC52 389 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 HDAC9Q9UKV0 1011 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 V9GY48 417 aaPredicted RBP18.1■□□□□ 0.49
PTPN11-201ENST00000351677 PARP1P09874 1014 aaKnown RBP18.1■□□□□ 0.49
PTPN11-201ENST00000351677 RILPL1Q5EBL4 403 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 BAG1Q99933 345 aaPredicted RBP18.1■□□□□ 0.49
PTPN11-201ENST00000351677 KIAA0232Q92628 1395 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 RHOXF2BP0C7M4 288 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms