RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 MAGEA10P43363 369 aaPredicted RBP19.55■□□□□ 0.72
CDK11B-201ENST00000340677 LMAN1P49257 510 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 TEFQ10587 303 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 SFMBT2Q5VUG0 894 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 SPATA21Q7Z572 469 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 SMCR8Q8TEV9 937 aaPredicted RBP19.55■□□□□ 0.72
CDK11B-201ENST00000340677 KCNF1Q9H3M0 494 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 UTP6Q9NYH9 597 aaKnown RBP19.55■□□□□ 0.72
CDK11B-201ENST00000340677 AKAP2Q9Y2D5 859 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 NWD2Q9ULI1 1742 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 SHTN1A0MZ66 631 aa19.54■□□□□ 0.72
CDK11B-201ENST00000340677 NF2P35240 595 aa19.54■□□□□ 0.72
CDK11B-201ENST00000340677 PPFIA4O75335 1185 aa19.54■□□□□ 0.72
CDK11B-201ENST00000340677 IFNL2Q8IZJ0 200 aa19.54■□□□□ 0.72
CDK11B-201ENST00000340677 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
CDK11B-201ENST00000340677 ZNF215Q9UL58 517 aaPredicted RBP19.54■□□□□ 0.72
CDK11B-201ENST00000340677 ABCC4O15439 1325 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 A0A087WUV0 522 aaPredicted RBP19.53■□□□□ 0.72
CDK11B-201ENST00000340677 PHKG2P15735 406 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 ZCCHC17Q9NP64 241 aaKnown RBP19.53■□□□□ 0.72
CDK11B-201ENST00000340677 MRFAP1Q9Y605 127 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 NRAPQ86VF7 1730 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 H2AFXP16104 143 aaPredicted RBP19.53■□□□□ 0.72
CDK11B-201ENST00000340677 GPTP24298 496 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 EXOC4Q96A65 974 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 PNMA2Q9UL42 364 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 RABL2BQ9UNT1 228 aa19.53■□□□□ 0.72
CDK11B-201ENST00000340677 KDM6AO15550 1401 aaPredicted RBP19.52■□□□□ 0.72
CDK11B-201ENST00000340677 ELL2O00472 640 aaPredicted RBP19.52■□□□□ 0.72
CDK11B-201ENST00000340677 ZRANB2O95218 330 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDK11B-201ENST00000340677 MECOMQ03112 1051 aa19.52■□□□□ 0.72
CDK11B-201ENST00000340677 EZH1Q92800 747 aaPredicted RBP19.52■□□□□ 0.72
CDK11B-201ENST00000340677 UBXN6Q9BZV1 441 aa19.52■□□□□ 0.72
CDK11B-201ENST00000340677 MAMSTRQ6ZN01 415 aa19.52■□□□□ 0.71
CDK11B-201ENST00000340677 TOM1L2Q6ZVM7 507 aa19.52■□□□□ 0.71
CDK11B-201ENST00000340677 TAF4BQ92750 862 aa19.52■□□□□ 0.71
CDK11B-201ENST00000340677 SAPCD2Q86UD0 394 aa19.51■□□□□ 0.71
CDK11B-201ENST00000340677 RBM17Q96I25 401 aaKnown RBP19.51■□□□□ 0.71
CDK11B-201ENST00000340677 MIS18AQ9NYP9 233 aa19.51■□□□□ 0.71
CDK11B-201ENST00000340677 TBC1D7Q9P0N9 293 aa19.51■□□□□ 0.71
CDK11B-201ENST00000340677 TMEM63CQ9P1W3 806 aa19.51■□□□□ 0.71
CDK11B-201ENST00000340677 PPME1Q9Y570 386 aa19.51■□□□□ 0.71
CDK11B-201ENST00000340677 HEG1Q9ULI3 1381 aa19.51■□□□□ 0.71
CDK11B-201ENST00000340677 MRPL12P52815 198 aaKnown RBP19.51■□□□□ 0.71
CDK11B-201ENST00000340677 MPRIPQ6WCQ1 1025 aa19.51■□□□□ 0.71
CDK11B-201ENST00000340677 C16orf45Q96MC5 204 aaPredicted RBP19.51■□□□□ 0.71
CDK11B-201ENST00000340677 KIF2AO00139 706 aaPredicted RBP19.5■□□□□ 0.71
CDK11B-201ENST00000340677 MARCH6O60337 910 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 RANBP1P43487 201 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 KRT24Q2M2I5 525 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 ACBD5Q5T8D3 534 aaPredicted RBP19.5■□□□□ 0.71
CDK11B-201ENST00000340677 ERC1Q8IUD2 1116 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 NEK9Q8TD19 979 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 DCAF5Q96JK2 942 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 SLC27A2O14975 620 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 XBP1P17861 261 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 FLT3P36888 993 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 DBN1Q16643 649 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 KIAA0825Q8IV33 1275 aa19.5■□□□□ 0.71
CDK11B-201ENST00000340677 ADCY5O95622 1261 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 OAS2P29728 719 aaKnown RBP19.49■□□□□ 0.71
CDK11B-201ENST00000340677 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
CDK11B-201ENST00000340677 UNC45AQ9H3U1 944 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 USP25Q9UHP3 1055 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 PCDH11XQ9BZA7 1347 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 PCDH11YQ9BZA8 1340 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 IL2RBP14784 551 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 EVA1CP58658 441 aa19.49■□□□□ 0.71
CDK11B-201ENST00000340677 CTDP1Q9Y5B0 961 aaPredicted RBP19.49■□□□□ 0.71
CDK11B-201ENST00000340677 RGS12O14924 1447 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 SKAP2O75563 359 aaPredicted RBP19.48■□□□□ 0.71
CDK11B-201ENST00000340677 PHACTR1Q9C0D0 580 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 BTBD11A6QL63 1104 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 SASH1O94885 1247 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 CLCN6P51797 869 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 PRPF4BQ13523 1007 aaKnown RBP19.48■□□□□ 0.71
CDK11B-201ENST00000340677 HSP90B2PQ58FF3 399 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 TMEM110Q86TL2 294 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 TMEM57Q8N5G2 664 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 TSGA10Q9BZW7 698 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 TSPY26PQ9H489 355 aa19.48■□□□□ 0.71
CDK11B-201ENST00000340677 PUF60Q9UHX1 559 aaKnown RBP19.48■□□□□ 0.71
CDK11B-201ENST00000340677 RTN3O95197 1032 aaPredicted RBP19.47■□□□□ 0.71
CDK11B-201ENST00000340677 TRPC1P48995 793 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 CACTIN-AS1Q8N1I8 211 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 TEKT1Q969V4 418 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 ERO1AQ96HE7 468 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 TRAIPQ9BWF2 469 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 IRF2BPLQ9H1B7 796 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 DISP2A7MBM2 1401 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 CYP27B1O15528 508 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 SMARCA5O60264 1052 aaPredicted RBP19.47■□□□□ 0.71
CDK11B-201ENST00000340677 RPS6KA5O75582 802 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 GJA8P48165 433 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 NKX1-1Q15270 411 aaPredicted RBP19.47■□□□□ 0.71
CDK11B-201ENST00000340677 STAG2Q8N3U4 1231 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 STK31Q9BXU1 1019 aa19.47■□□□□ 0.71
CDK11B-201ENST00000340677 UBA5Q9GZZ9 404 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms