RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ZNF70Q9UC06 446 aaPredicted RBP21.28■■□□□ 1
BRCC3-202ENST00000340647 ZBED9Q6R2W3 1325 aa21.28■■□□□ 1
BRCC3-202ENST00000340647 CA12O43570 354 aa21.27■■□□□ 1
BRCC3-202ENST00000340647 ADORA1P30542 326 aa21.27■■□□□ 1
BRCC3-202ENST00000340647 MAP3K11Q16584 847 aa21.27■■□□□ 1
BRCC3-202ENST00000340647 TEPSINQ96N21 525 aa21.27■■□□□ 1
BRCC3-202ENST00000340647 RNF186Q9NXI6 227 aa21.27■■□□□ 1
BRCC3-202ENST00000340647 IPO8O15397 1037 aaKnown RBP21.26■□□□□ 0.99
BRCC3-202ENST00000340647 GNAI3P08754 354 aa21.26■□□□□ 0.99
BRCC3-202ENST00000340647 RLBP1P12271 317 aa21.26■□□□□ 0.99
BRCC3-202ENST00000340647 SLC5A1P13866 664 aa21.26■□□□□ 0.99
BRCC3-202ENST00000340647 IL15P40933 162 aaPredicted RBP21.26■□□□□ 0.99
BRCC3-202ENST00000340647 RBM5P52756 815 aaKnown RBP eCLIP21.26■□□□□ 0.99
BRCC3-202ENST00000340647 MLLT1Q03111 559 aaPredicted RBP21.26■□□□□ 0.99
BRCC3-202ENST00000340647 RASA3Q14644 834 aa21.26■□□□□ 0.99
BRCC3-202ENST00000340647 VEZTQ9HBM0 779 aa21.26■□□□□ 0.99
BRCC3-202ENST00000340647 TNRC18O15417 2968 aaPredicted RBP21.25■□□□□ 0.99
BRCC3-202ENST00000340647 PNMA6EA0A0J9YXQ4 647 aa21.25■□□□□ 0.99
BRCC3-202ENST00000340647 PHKA1P46020 1223 aa21.25■□□□□ 0.99
BRCC3-202ENST00000340647 HDLBPQ00341 1268 aaKnown RBP21.25■□□□□ 0.99
BRCC3-202ENST00000340647 ATP2B3Q16720 1220 aa21.25■□□□□ 0.99
BRCC3-202ENST00000340647 CEP126Q9P2H0 1117 aa21.25■□□□□ 0.99
BRCC3-202ENST00000340647 SRGAP3O43295 1099 aa21.24■□□□□ 0.99
BRCC3-202ENST00000340647 TTLL12Q14166 644 aaPredicted RBP21.24■□□□□ 0.99
BRCC3-202ENST00000340647 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
BRCC3-202ENST00000340647 APOBEC3HQ6NTF7 200 aaKnown RBP21.24■□□□□ 0.99
BRCC3-202ENST00000340647 TBC1D22AQ8WUA7 517 aa21.24■□□□□ 0.99
BRCC3-202ENST00000340647 MRIQ9BWK5 157 aa21.24■□□□□ 0.99
BRCC3-202ENST00000340647 ANGEL1Q9UNK9 670 aaKnown RBP21.24■□□□□ 0.99
BRCC3-202ENST00000340647 PPP2R3BQ9Y5P8 575 aa21.24■□□□□ 0.99
BRCC3-202ENST00000340647 MYH2Q9UKX2 1941 aa21.23■□□□□ 0.99
BRCC3-202ENST00000340647 ZBTB22O15209 634 aa21.23■□□□□ 0.99
BRCC3-202ENST00000340647 MYO1BO43795 1136 aa21.23■□□□□ 0.99
BRCC3-202ENST00000340647 USP2O75604 605 aaPredicted RBP21.23■□□□□ 0.99
BRCC3-202ENST00000340647 TIMM10P62072 90 aa21.23■□□□□ 0.99
BRCC3-202ENST00000340647 CLMNQ96JQ2 1002 aa21.23■□□□□ 0.99
BRCC3-202ENST00000340647 TRPA1O75762 1119 aa21.22■□□□□ 0.99
BRCC3-202ENST00000340647 NF2P35240 595 aa21.22■□□□□ 0.99
BRCC3-202ENST00000340647 ZDHHC15Q96MV8 337 aa21.22■□□□□ 0.99
BRCC3-202ENST00000340647 SAGE1Q9NXZ1 904 aa21.22■□□□□ 0.99
BRCC3-202ENST00000340647 HDAC5Q9UQL6 1122 aa21.22■□□□□ 0.99
BRCC3-202ENST00000340647 FRAT2O75474 233 aaPredicted RBP21.21■□□□□ 0.99
BRCC3-202ENST00000340647 GNAI2P04899 355 aa21.21■□□□□ 0.99
BRCC3-202ENST00000340647 TM4SF4P48230 202 aa21.21■□□□□ 0.99
BRCC3-202ENST00000340647 CACNB3P54284 484 aa21.21■□□□□ 0.99
BRCC3-202ENST00000340647 TFCP2Q12800 502 aa21.21■□□□□ 0.99
BRCC3-202ENST00000340647 MKRN3Q13064 507 aaKnown RBP21.21■□□□□ 0.99
BRCC3-202ENST00000340647 ARMC9Q7Z3E5 817 aa21.21■□□□□ 0.99
BRCC3-202ENST00000340647 TMEM39BQ9GZU3 492 aa21.21■□□□□ 0.99
BRCC3-202ENST00000340647 SUGT1Q9Y2Z0 365 aa21.21■□□□□ 0.99
BRCC3-202ENST00000340647 TCP10L2B9ZVM9 353 aa21.2■□□□□ 0.98
BRCC3-202ENST00000340647 PRDX5P30044 214 aa21.2■□□□□ 0.98
BRCC3-202ENST00000340647 GJA5P36382 358 aa21.2■□□□□ 0.98
BRCC3-202ENST00000340647 DGKZQ13574 1117 aa21.2■□□□□ 0.98
BRCC3-202ENST00000340647 SPRYD7Q5W111 196 aa21.2■□□□□ 0.98
BRCC3-202ENST00000340647 CCDC102BQ68D86 513 aa21.2■□□□□ 0.98
BRCC3-202ENST00000340647 TEKT1Q969V4 418 aa21.2■□□□□ 0.98
BRCC3-202ENST00000340647 ZBTB7BO15156 539 aaPredicted RBP21.19■□□□□ 0.98
BRCC3-202ENST00000340647 POLA2Q14181 598 aa21.19■□□□□ 0.98
BRCC3-202ENST00000340647 HHIPL2Q6UWX4 724 aa21.19■□□□□ 0.98
BRCC3-202ENST00000340647 WDR66Q8TBY9 1149 aa21.19■□□□□ 0.98
BRCC3-202ENST00000340647 MYO5AQ9Y4I1 1855 aaKnown RBP21.18■□□□□ 0.98
BRCC3-202ENST00000340647 A0A1B0GUL7 405 aa21.18■□□□□ 0.98
BRCC3-202ENST00000340647 DIXDC1Q155Q3 683 aa21.18■□□□□ 0.98
BRCC3-202ENST00000340647 SUPT20HL1Q3ZLR7 823 aa21.18■□□□□ 0.98
BRCC3-202ENST00000340647 R3HDMLQ9H3Y0 253 aa21.18■□□□□ 0.98
BRCC3-202ENST00000340647 C1orf115Q9H7X2 142 aa21.18■□□□□ 0.98
BRCC3-202ENST00000340647 SALL1Q9NSC2 1324 aa21.18■□□□□ 0.98
BRCC3-202ENST00000340647 RASGRF1Q13972 1273 aa21.17■□□□□ 0.98
BRCC3-202ENST00000340647 REM2Q8IYK8 340 aaPredicted RBP21.17■□□□□ 0.98
BRCC3-202ENST00000340647 XAGE2Q96GT9 111 aa21.17■□□□□ 0.98
BRCC3-202ENST00000340647 DAGLAQ9Y4D2 1042 aa21.17■□□□□ 0.98
BRCC3-202ENST00000340647 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.16■□□□□ 0.98
BRCC3-202ENST00000340647 SSH3Q8TE77 659 aa21.16■□□□□ 0.98
BRCC3-202ENST00000340647 WNK4Q96J92 1243 aa21.16■□□□□ 0.98
BRCC3-202ENST00000340647 PPP1R12BO60237 982 aaPredicted RBP21.15■□□□□ 0.98
BRCC3-202ENST00000340647 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
BRCC3-202ENST00000340647 TNFAIP1Q13829 316 aa21.15■□□□□ 0.98
BRCC3-202ENST00000340647 ZNF384Q8TF68 577 aa21.15■□□□□ 0.98
BRCC3-202ENST00000340647 DENND2AQ9ULE3 1009 aa21.15■□□□□ 0.98
BRCC3-202ENST00000340647 AK9Q5TCS8 1911 aa21.14■□□□□ 0.98
BRCC3-202ENST00000340647 MAST3O60307 1309 aa21.14■□□□□ 0.97
BRCC3-202ENST00000340647 SEMA3EO15041 775 aa21.14■□□□□ 0.97
BRCC3-202ENST00000340647 FKBP1CQ5VVH2 108 aa21.14■□□□□ 0.97
BRCC3-202ENST00000340647 CDC42EP5Q6NZY7 148 aa21.14■□□□□ 0.97
BRCC3-202ENST00000340647 PANK1Q8TE04 598 aa21.14■□□□□ 0.97
BRCC3-202ENST00000340647 SLC10A4Q96EP9 437 aa21.14■□□□□ 0.97
BRCC3-202ENST00000340647 UNCXA6NJT0 531 aa21.13■□□□□ 0.97
BRCC3-202ENST00000340647 TBC1D8O95759 1140 aa21.13■□□□□ 0.97
BRCC3-202ENST00000340647 NFIAQ12857 509 aa21.13■□□□□ 0.97
BRCC3-202ENST00000340647 PI16Q6UXB8 463 aa21.13■□□□□ 0.97
BRCC3-202ENST00000340647 FAM83AQ86UY5 434 aa21.13■□□□□ 0.97
BRCC3-202ENST00000340647 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.13■□□□□ 0.97
BRCC3-202ENST00000340647 CNKSR2Q8WXI2 1034 aa21.13■□□□□ 0.97
BRCC3-202ENST00000340647 PDS5AQ29RF7 1337 aaKnown RBP21.12■□□□□ 0.97
BRCC3-202ENST00000340647 ANKRD13AQ8IZ07 590 aa21.12■□□□□ 0.97
BRCC3-202ENST00000340647 GNL3LQ9NVN8 582 aaKnown RBP21.12■□□□□ 0.97
BRCC3-202ENST00000340647 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.12■□□□□ 0.97
BRCC3-202ENST00000340647 FAM198AQ9UFP1 575 aa21.12■□□□□ 0.97
BRCC3-202ENST00000340647 IGF2BP3O00425 579 aaKnown RBP eCLIP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms