RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 PDCP20941 246 aa17.76■□□□□ 0.43
LIMK2-203ENST00000340552 KCNJ6P48051 423 aa17.76■□□□□ 0.43
LIMK2-203ENST00000340552 PTH1RQ03431 593 aa17.76■□□□□ 0.43
LIMK2-203ENST00000340552 COL9A3Q14050 684 aaPredicted RBP17.76■□□□□ 0.43
LIMK2-203ENST00000340552 PRPF40BQ6NWY9 871 aaKnown RBP17.76■□□□□ 0.43
LIMK2-203ENST00000340552 TMC6Q7Z403 805 aa17.76■□□□□ 0.43
LIMK2-203ENST00000340552 CCDC150Q8NCX0 1101 aa17.76■□□□□ 0.43
LIMK2-203ENST00000340552 SPATA31A1Q5TZJ5 1347 aa17.76■□□□□ 0.43
LIMK2-203ENST00000340552 TTC41PQ6P2S7 1318 aa17.76■□□□□ 0.43
LIMK2-203ENST00000340552 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
LIMK2-203ENST00000340552 SFPQP23246 707 aaKnown RBP eCLIP17.75■□□□□ 0.43
LIMK2-203ENST00000340552 EPHA10Q5JZY3 1008 aa17.75■□□□□ 0.43
LIMK2-203ENST00000340552 DEF6Q9H4E7 631 aa17.75■□□□□ 0.43
LIMK2-203ENST00000340552 A0A087WZG4 1122 aa17.75■□□□□ 0.43
LIMK2-203ENST00000340552 UBE3BQ7Z3V4 1068 aa17.75■□□□□ 0.43
LIMK2-203ENST00000340552 ERC1Q8IUD2 1116 aa17.75■□□□□ 0.43
LIMK2-203ENST00000340552 ANKRD65E5RJM6 399 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 GPR161Q8N6U8 529 aaKnown RBP17.74■□□□□ 0.43
LIMK2-203ENST00000340552 FBXW7Q969H0 707 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 CDCA7Q9BWT1 371 aaPredicted RBP17.74■□□□□ 0.43
LIMK2-203ENST00000340552 TEX13AQ9BXU3 409 aaPredicted RBP17.74■□□□□ 0.43
LIMK2-203ENST00000340552 BCL9O00512 1426 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 CLASRPQ8N2M8 674 aaKnown RBP17.74■□□□□ 0.43
LIMK2-203ENST00000340552 PARD6BQ9BYG5 372 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 TM6SF1Q9BZW5 370 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 ZBTB3Q9H5J0 574 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 THRAP3Q9Y2W1 955 aaKnown RBP17.74■□□□□ 0.43
LIMK2-203ENST00000340552 LRP6O75581 1613 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 SMC2O95347 1197 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 XPO4Q9C0E2 1151 aaKnown RBP17.74■□□□□ 0.43
LIMK2-203ENST00000340552 VPS18Q9P253 973 aa17.74■□□□□ 0.43
LIMK2-203ENST00000340552 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
LIMK2-203ENST00000340552 ERCC4Q92889 916 aaPredicted RBP17.73■□□□□ 0.43
LIMK2-203ENST00000340552 CEP83Q9Y592 693 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 UBAP1LF5GYI3 381 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 CCDC172P0C7W6 258 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 CORO7P57737 925 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 GNL2Q13823 731 aaKnown RBP17.73■□□□□ 0.43
LIMK2-203ENST00000340552 BANK1Q8NDB2 785 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 GOLPH3LQ9H4A5 285 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 ZSCAN16Q9H4T2 348 aaPredicted RBP17.73■□□□□ 0.43
LIMK2-203ENST00000340552 ANO10Q9NW15 660 aa17.73■□□□□ 0.43
LIMK2-203ENST00000340552 RPS6KA5O75582 802 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 DDB1Q16531 1140 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 LONRF2Q1L5Z9 754 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
LIMK2-203ENST00000340552 MYH15Q9Y2K3 1946 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 CTAGE5O15320 804 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 SUGP1Q8IWZ8 645 aaKnown RBP17.72■□□□□ 0.43
LIMK2-203ENST00000340552 CEP57L1Q8IYX8 460 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 IFNKQ9P0W0 207 aa17.72■□□□□ 0.43
LIMK2-203ENST00000340552 MAP2K7O14733 419 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 STARD3NLO95772 234 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 RSRC2Q7L4I2 434 aaKnown RBP17.71■□□□□ 0.43
LIMK2-203ENST00000340552 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.43
LIMK2-203ENST00000340552 SIL1Q9H173 461 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 KCNG1Q9UIX4 513 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 SASH1O94885 1247 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 CASP7P55210 303 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
LIMK2-203ENST00000340552 KCNB2Q92953 911 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 CXorf56Q9H5V9 222 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
LIMK2-203ENST00000340552 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
LIMK2-203ENST00000340552 COL15A1P39059 1388 aa17.71■□□□□ 0.43
LIMK2-203ENST00000340552 RESTQ13127 1097 aa17.7■□□□□ 0.42
LIMK2-203ENST00000340552 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
LIMK2-203ENST00000340552 TCEANC2Q96MN5 208 aa17.7■□□□□ 0.42
LIMK2-203ENST00000340552 PDE11AQ9HCR9 933 aa17.7■□□□□ 0.42
LIMK2-203ENST00000340552 GSCP56915 257 aaPredicted RBP17.7■□□□□ 0.42
LIMK2-203ENST00000340552 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
LIMK2-203ENST00000340552 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
LIMK2-203ENST00000340552 SPATA31A5Q5VU36 1347 aa17.7■□□□□ 0.42
LIMK2-203ENST00000340552 SPATA31A7Q8IWB4 1347 aa17.7■□□□□ 0.42
LIMK2-203ENST00000340552 SWT1Q5T5J6 900 aaKnown RBP17.69■□□□□ 0.42
LIMK2-203ENST00000340552 MCTP2Q6DN12 878 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
LIMK2-203ENST00000340552 NWD2Q9ULI1 1742 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 SLIT2O94813 1529 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 H7C1W4 665 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 APOBRQ0VD83 1088 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 CCDC91Q7Z6B0 441 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
LIMK2-203ENST00000340552 PPP2R3AQ06190 1150 aa17.68■□□□□ 0.42
LIMK2-203ENST00000340552 NECTIN1Q15223 517 aa17.68■□□□□ 0.42
LIMK2-203ENST00000340552 AACSQ86V21 672 aa17.68■□□□□ 0.42
LIMK2-203ENST00000340552 FAM177A1Q8N128 213 aaPredicted RBP17.68■□□□□ 0.42
LIMK2-203ENST00000340552 CCP110O43303 1012 aa17.68■□□□□ 0.42
LIMK2-203ENST00000340552 NRDCO43847 1150 aa17.68■□□□□ 0.42
LIMK2-203ENST00000340552 N4BP1O75113 896 aaKnown RBP17.68■□□□□ 0.42
LIMK2-203ENST00000340552 MAP3K9P80192 1104 aa17.68■□□□□ 0.42
LIMK2-203ENST00000340552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.68■□□□□ 0.42
LIMK2-203ENST00000340552 GLRX3O76003 335 aaKnown RBP17.68■□□□□ 0.42
LIMK2-203ENST00000340552 CPP00450 1065 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms