RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FRAT2O75474 233 aaPredicted RBP18.91■□□□□ 0.62
PRKN-201ENST00000338468 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
PRKN-201ENST00000338468 TBC1D22AQ8WUA7 517 aa18.91■□□□□ 0.62
PRKN-201ENST00000338468 ZIC5Q96T25 663 aa18.91■□□□□ 0.62
PRKN-201ENST00000338468 SAGE1Q9NXZ1 904 aa18.91■□□□□ 0.62
PRKN-201ENST00000338468 MYH13Q9UKX3 1938 aa18.9■□□□□ 0.62
PRKN-201ENST00000338468 A0A1B0GUL7 405 aa18.9■□□□□ 0.62
PRKN-201ENST00000338468 ZBTB22O15209 634 aa18.9■□□□□ 0.62
PRKN-201ENST00000338468 TNRC18O15417 2968 aaPredicted RBP18.9■□□□□ 0.62
PRKN-201ENST00000338468 PRAMEF18Q5VWM3 479 aa18.9■□□□□ 0.62
PRKN-201ENST00000338468 CCDC102BQ68D86 513 aa18.9■□□□□ 0.62
PRKN-201ENST00000338468 RGMBQ6NW40 437 aa18.9■□□□□ 0.62
PRKN-201ENST00000338468 GBA2Q9HCG7 927 aaPredicted RBP18.9■□□□□ 0.62
PRKN-201ENST00000338468 ECM29Q5VYK3 1845 aa18.9■□□□□ 0.62
PRKN-201ENST00000338468 G3BP1Q13283 466 aaKnown RBP eCLIP18.89■□□□□ 0.61
PRKN-201ENST00000338468 C2orf69Q8N8R5 385 aa18.89■□□□□ 0.61
PRKN-201ENST00000338468 CCDC102AQ96A19 550 aa18.89■□□□□ 0.61
PRKN-201ENST00000338468 XAGE2Q96GT9 111 aa18.89■□□□□ 0.61
PRKN-201ENST00000338468 ZBTB40Q9NUA8 1239 aa18.89■□□□□ 0.61
PRKN-201ENST00000338468 SERPINA10Q9UK55 444 aa18.89■□□□□ 0.61
PRKN-201ENST00000338468 AKAP2Q9Y2D5 859 aa18.89■□□□□ 0.61
PRKN-201ENST00000338468 NOP58Q9Y2X3 529 aaKnown RBP18.89■□□□□ 0.61
PRKN-201ENST00000338468 PDE4DIPQ5VU43 2346 aa18.88■□□□□ 0.61
PRKN-201ENST00000338468 CRKP46108 304 aa18.88■□□□□ 0.61
PRKN-201ENST00000338468 YTHDC1Q96MU7 727 aaKnown RBP18.88■□□□□ 0.61
PRKN-201ENST00000338468 DDX19BQ9UMR2 479 aa18.88■□□□□ 0.61
PRKN-201ENST00000338468 CLRN2A0PK11 232 aa18.87■□□□□ 0.61
PRKN-201ENST00000338468 FAM155AB1AL88 458 aaPredicted RBP18.87■□□□□ 0.61
PRKN-201ENST00000338468 RBM5P52756 815 aaKnown RBP eCLIP18.87■□□□□ 0.61
PRKN-201ENST00000338468 PDE3AQ14432 1141 aa18.87■□□□□ 0.61
PRKN-201ENST00000338468 APOBEC3FQ8IUX4 373 aaKnown RBP18.87■□□□□ 0.61
PRKN-201ENST00000338468 WDR66Q8TBY9 1149 aa18.87■□□□□ 0.61
PRKN-201ENST00000338468 SUGT1Q9Y2Z0 365 aa18.87■□□□□ 0.61
PRKN-201ENST00000338468 SEMA3EO15041 775 aa18.86■□□□□ 0.61
PRKN-201ENST00000338468 SURF6O75683 361 aaKnown RBP18.86■□□□□ 0.61
PRKN-201ENST00000338468 ZNF157P51786 506 aaPredicted RBP18.86■□□□□ 0.61
PRKN-201ENST00000338468 HDLBPQ00341 1268 aaKnown RBP18.86■□□□□ 0.61
PRKN-201ENST00000338468 RASGRF1Q13972 1273 aa18.86■□□□□ 0.61
PRKN-201ENST00000338468 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
PRKN-201ENST00000338468 SALL1Q9NSC2 1324 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 KIF23Q02241 960 aaPredicted RBP18.85■□□□□ 0.61
PRKN-201ENST00000338468 SPDYE2Q495Y8 402 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 SIRT2Q8IXJ6 389 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 NEUROD6Q96NK8 337 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 MRIQ9BWK5 157 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 DEFB129Q9H1M3 183 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 GPR108Q9NPR9 543 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 ZNF70Q9UC06 446 aaPredicted RBP18.85■□□□□ 0.61
PRKN-201ENST00000338468 DENND2AQ9ULE3 1009 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 PAPPA2Q9BXP8 1791 aa18.85■□□□□ 0.61
PRKN-201ENST00000338468 PRDX5P30044 214 aa18.84■□□□□ 0.61
PRKN-201ENST00000338468 TNNI3KQ59H18 835 aa18.84■□□□□ 0.61
PRKN-201ENST00000338468 MOB2Q70IA6 237 aa18.84■□□□□ 0.61
PRKN-201ENST00000338468 TDRD3Q9H7E2 651 aaKnown RBP18.84■□□□□ 0.61
PRKN-201ENST00000338468 FPGT-TNNI3KV9GXZ4 949 aa18.84■□□□□ 0.61
PRKN-201ENST00000338468 SSC5DA1L4H1 1573 aa18.84■□□□□ 0.61
PRKN-201ENST00000338468 PDS5AQ29RF7 1337 aaKnown RBP18.83■□□□□ 0.61
PRKN-201ENST00000338468 MYO1BO43795 1136 aa18.83■□□□□ 0.6
PRKN-201ENST00000338468 TRPA1O75762 1119 aa18.83■□□□□ 0.6
PRKN-201ENST00000338468 SOX10P56693 466 aa18.83■□□□□ 0.6
PRKN-201ENST00000338468 APOBEC3HQ6NTF7 200 aaKnown RBP18.83■□□□□ 0.6
PRKN-201ENST00000338468 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.83■□□□□ 0.6
PRKN-201ENST00000338468 TEKT1Q969V4 418 aa18.83■□□□□ 0.6
PRKN-201ENST00000338468 ZDHHC15Q96MV8 337 aa18.83■□□□□ 0.6
PRKN-201ENST00000338468 VEZTQ9HBM0 779 aa18.83■□□□□ 0.6
PRKN-201ENST00000338468 RNF186Q9NXI6 227 aa18.83■□□□□ 0.6
PRKN-201ENST00000338468 SLC10A3P09131 477 aa18.82■□□□□ 0.6
PRKN-201ENST00000338468 FKBP1BP68106 108 aa18.82■□□□□ 0.6
PRKN-201ENST00000338468 OS9Q13438 667 aaPredicted RBP18.82■□□□□ 0.6
PRKN-201ENST00000338468 HHIPL2Q6UWX4 724 aa18.82■□□□□ 0.6
PRKN-201ENST00000338468 RPAP2Q8IXW5 612 aaPredicted RBP18.82■□□□□ 0.6
PRKN-201ENST00000338468 AKAP11Q9UKA4 1901 aa18.82■□□□□ 0.6
PRKN-201ENST00000338468 MAST3O60307 1309 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 ARID4AP29374 1257 aaPredicted RBP18.81■□□□□ 0.6
PRKN-201ENST00000338468 RASA3Q14644 834 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 DIXDC1Q155Q3 683 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 PI16Q6UXB8 463 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 DBNDD2Q9BQY9 259 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 HMG20BQ9P0W2 317 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 EXOC6BQ9Y2D4 811 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 PPP2R3BQ9Y5P8 575 aa18.81■□□□□ 0.6
PRKN-201ENST00000338468 UBE2Q2LH0YL09 131 aa18.8■□□□□ 0.6
PRKN-201ENST00000338468 LDHBP07195 334 aaKnown RBP18.8■□□□□ 0.6
PRKN-201ENST00000338468 CDAN1Q8IWY9 1227 aa18.8■□□□□ 0.6
PRKN-201ENST00000338468 EAF2Q96CJ1 260 aaPredicted RBP18.8■□□□□ 0.6
PRKN-201ENST00000338468 FZD1Q9UP38 647 aa18.8■□□□□ 0.6
PRKN-201ENST00000338468 DAGLAQ9Y4D2 1042 aa18.8■□□□□ 0.6
PRKN-201ENST00000338468 MCAMP43121 646 aa18.79■□□□□ 0.6
PRKN-201ENST00000338468 CACNB3P54284 484 aa18.79■□□□□ 0.6
PRKN-201ENST00000338468 GORABQ5T7V8 394 aa18.79■□□□□ 0.6
PRKN-201ENST00000338468 NBPF12Q5TAG4 269 aaPredicted RBP18.79■□□□□ 0.6
PRKN-201ENST00000338468 CTU1Q7Z7A3 348 aaKnown RBP18.79■□□□□ 0.6
PRKN-201ENST00000338468 REM2Q8IYK8 340 aaPredicted RBP18.79■□□□□ 0.6
PRKN-201ENST00000338468 TEPSINQ96N21 525 aa18.79■□□□□ 0.6
PRKN-201ENST00000338468 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
PRKN-201ENST00000338468 DBNLQ9UJU6 430 aaKnown RBP18.79■□□□□ 0.6
PRKN-201ENST00000338468 TCP10L2B9ZVM9 353 aa18.78■□□□□ 0.6
PRKN-201ENST00000338468 PRKG1Q13976 671 aa18.78■□□□□ 0.6
PRKN-201ENST00000338468 RASAL3Q86YV0 1011 aa18.78■□□□□ 0.6
PRKN-201ENST00000338468 SPATA5Q8NB90 893 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms