RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
HIF1A-202ENST00000337138 KRT32Q14532 448 aa11.77□□□□□ -0.53
HIF1A-202ENST00000337138 SYNE3Q6ZMZ3 975 aa11.77□□□□□ -0.53
HIF1A-202ENST00000337138 CEP57L1Q8IYX8 460 aa11.77□□□□□ -0.53
HIF1A-202ENST00000337138 MNS1Q8NEH6 495 aa11.77□□□□□ -0.53
HIF1A-202ENST00000337138 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
HIF1A-202ENST00000337138 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
HIF1A-202ENST00000337138 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
HIF1A-202ENST00000337138 PDILTQ8N807 584 aa11.76□□□□□ -0.53
HIF1A-202ENST00000337138 RGS22Q8NE09 1264 aa11.76□□□□□ -0.53
HIF1A-202ENST00000337138 ZNF215Q9UL58 517 aaPredicted RBP11.76□□□□□ -0.53
HIF1A-202ENST00000337138 LAMB1P07942 1786 aa11.76□□□□□ -0.53
HIF1A-202ENST00000337138 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
HIF1A-202ENST00000337138 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
HIF1A-202ENST00000337138 GOLGA8FQ08AF8 430 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 NCBP1Q09161 790 aaKnown RBP11.75□□□□□ -0.53
HIF1A-202ENST00000337138 GOLGA8DPQ0D2H9 430 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 ELF2Q15723 593 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 STX1AQ16623 288 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 NID2Q14112 1375 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 CHMP4CQ96CF2 233 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 IFNKQ9P0W0 207 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
HIF1A-202ENST00000337138 ZNF396Q96N95 335 aaPredicted RBP11.75□□□□□ -0.53
HIF1A-202ENST00000337138 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
HIF1A-202ENST00000337138 PPP1R1BQ9UD71 204 aaPredicted RBP11.74□□□□□ -0.53
HIF1A-202ENST00000337138 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
HIF1A-202ENST00000337138 CABP4P57796 275 aa11.74□□□□□ -0.53
HIF1A-202ENST00000337138 CCZ1BP86790 482 aa11.74□□□□□ -0.53
HIF1A-202ENST00000337138 CCZ1P86791 482 aaPredicted RBP11.74□□□□□ -0.53
HIF1A-202ENST00000337138 RALYLQ86SE5 291 aaKnown RBP11.74□□□□□ -0.53
HIF1A-202ENST00000337138 LLPHQ9BRT6 129 aaKnown RBP11.74□□□□□ -0.53
HIF1A-202ENST00000337138 SYT10Q6XYQ8 523 aa11.74□□□□□ -0.53
HIF1A-202ENST00000337138 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.74□□□□□ -0.53
HIF1A-202ENST00000337138 C8orf76Q96K31 380 aa11.74□□□□□ -0.53
HIF1A-202ENST00000337138 ANO10Q9NW15 660 aa11.74□□□□□ -0.53
HIF1A-202ENST00000337138 FAM237AA0A1B0GTK4 181 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 SMTNL1A8MU46 457 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 SERPINC1P01008 464 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 SYCP1Q15431 976 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 LRRC8AQ8IWT6 810 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 KRT222Q8N1A0 295 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 CDK5RAP2Q96SN8 1893 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 MYH14Q7Z406 1995 aaKnown RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 KLF18A0A0U1RQI7 1052 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 SPECC1Q5M775 1068 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 NFXL1Q6ZNB6 911 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 FMR1NBQ8N0W7 255 aaPredicted RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 KBTBD3Q8NAB2 608 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 DSCC1Q9BVC3 393 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 TRIM34Q9BYJ4 488 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 ORC3Q9UBD5 711 aaPredicted RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 LRRC24Q50LG9 513 aa11.73□□□□□ -0.53
HIF1A-202ENST00000337138 UTP14CQ5TAP6 766 aaKnown RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 NAT10Q9H0A0 1025 aaKnown RBP11.73□□□□□ -0.53
HIF1A-202ENST00000337138 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 ANTXR2P58335 489 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 GPS2Q13227 327 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 NCAPHQ15003 741 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 RRP12Q5JTH9 1297 aaKnown RBP11.72□□□□□ -0.53
HIF1A-202ENST00000337138 PI16Q6UXB8 463 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 VGLL2Q8N8G2 317 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 KIF18AQ8NI77 898 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 ZSCAN16Q9H4T2 348 aaPredicted RBP11.72□□□□□ -0.53
HIF1A-202ENST00000337138 OGFRQ9NZT2 677 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 CLIC4Q9Y696 253 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 MAST3O60307 1309 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 SFPQP23246 707 aaKnown RBP eCLIP11.72□□□□□ -0.53
HIF1A-202ENST00000337138 NDUFA8P51970 172 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 DPCR1Q3MIW9 517 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 CFAP100Q494V2 611 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 TTC39AQ5SRH9 613 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 PUS3Q9BZE2 481 aaKnown RBP11.72□□□□□ -0.53
HIF1A-202ENST00000337138 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 ARGLU1Q9NWB6 273 aaPredicted RBP11.72□□□□□ -0.53
HIF1A-202ENST00000337138 CALCOCO1Q9P1Z2 691 aa11.72□□□□□ -0.53
HIF1A-202ENST00000337138 TPM4P67936 248 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 AIFM3Q96NN9 605 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 ZSWIM4Q9H7M6 989 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 ST7Q9NRC1 585 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 E7EWF7 191 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 M0R2C6 588 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 A1BGP04217 495 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 SLC3A2P08195 630 aaKnown RBP11.71□□□□□ -0.53
HIF1A-202ENST00000337138 PCDHA7Q9UN72 937 aa11.71□□□□□ -0.53
HIF1A-202ENST00000337138 URI1O94763 535 aaPredicted RBP11.71□□□□□ -0.54
HIF1A-202ENST00000337138 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.54
HIF1A-202ENST00000337138 MICU3Q86XE3 530 aa11.71□□□□□ -0.54
HIF1A-202ENST00000337138 PLBD2Q8NHP8 589 aa11.71□□□□□ -0.54
HIF1A-202ENST00000337138 MRPS27Q92552 414 aaKnown RBP11.71□□□□□ -0.54
HIF1A-202ENST00000337138 MYL10Q9BUA6 226 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms