RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 FDPSP14324 419 aaKnown RBP19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 C10orf67Q8IYJ2 551 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 ATP2B1P20020 1258 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 SFPQP23246 707 aaKnown RBP eCLIP19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 SCARF1Q14162 830 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 HSP90AA4PQ58FG1 418 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 ATL3Q6DD88 541 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 CCDC82Q8N4S0 544 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 KIF18AQ8NI77 898 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 KIAA1468Q9P260 1216 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 OVOS2A0A0G2JMS6 1433 aa19.11■□□□□ 0.65
CDC42EP4-201ENST00000335793 GPAA1O43292 621 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 SLC9C2Q5TAH2 1124 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 DHX40Q8IX18 779 aaKnown RBP19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 MEGF6O75095 1541 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 ZNF202O95125 648 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 SERPINC1P01008 464 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 CHRM1P11229 460 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 TRIM29Q14134 588 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 MYSM1Q5VVJ2 828 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 KRT222Q8N1A0 295 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 LINC00301Q8NCQ3 95 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 AIFM3Q96NN9 605 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 XPO4Q9C0E2 1151 aaKnown RBP19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 DDX41Q9UJV9 622 aaKnown RBP19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 FBXO18Q8NFZ0 1043 aa19.1■□□□□ 0.65
CDC42EP4-201ENST00000335793 RRP12Q5JTH9 1297 aaKnown RBP19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 KIF6Q6ZMV9 814 aa19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 ALG1Q9BT22 464 aa19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 MARF1Q9Y4F3 1742 aaKnown RBP19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 SYNE4Q8N205 404 aa19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 ENGASEQ8NFI3 743 aa19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 PHKBQ93100 1093 aa19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 RTEL1Q9NZ71 1219 aa19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 ZNF215Q9UL58 517 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP4-201ENST00000335793 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.65
CDC42EP4-201ENST00000335793 FMR1NBQ8N0W7 255 aaPredicted RBP19.08■□□□□ 0.65
CDC42EP4-201ENST00000335793 FAM177A1Q8N128 213 aaPredicted RBP19.08■□□□□ 0.65
CDC42EP4-201ENST00000335793 JCADQ9P266 1359 aa19.08■□□□□ 0.65
CDC42EP4-201ENST00000335793 METAP2P50579 478 aaKnown RBP eCLIP19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 SARM1Q6SZW1 724 aa19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 GPR108Q9NPR9 543 aa19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 PATL2C9JE40 543 aaKnown RBP19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 ZFYP08048 801 aaPredicted RBP19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 CDC25BP30305 580 aa19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 ANO1Q5XXA6 986 aa19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 APPBP2Q92624 585 aa19.08■□□□□ 0.64
CDC42EP4-201ENST00000335793 SYKP43405 635 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 GTF2A1P52655 376 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 GSDMDP57764 484 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 RAD51AP2Q09MP3 1159 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 PTPN21Q16825 1174 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 CFAP100Q494V2 611 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 MYL10Q9BUA6 226 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 PALLDQ8WX93 1383 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 LMO7Q8WWI1 1683 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 N4BP2Q86UW6 1770 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 RFX7Q2KHR2 1363 aa19.07■□□□□ 0.64
CDC42EP4-201ENST00000335793 CTIFO43310 598 aaKnown RBP19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 HELBQ8NG08 1087 aaPredicted RBP19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 DENND2AQ9ULE3 1009 aa19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 NEK11Q8NG66 645 aa19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 B4E1Z4 1266 aa19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 TRIM66O15016 1216 aa19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 POLR3GO15318 223 aaPredicted RBP19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
CDC42EP4-201ENST00000335793 PFKFB1P16118 471 aa19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 SYT10Q6XYQ8 523 aa19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 CCAR2Q8N163 923 aaKnown RBP19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 PDILTQ8N807 584 aa19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 TMOD3Q9NYL9 352 aa19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 SPECC1Q5M775 1068 aa19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 BRAPQ7Z569 592 aa19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
CDC42EP4-201ENST00000335793 KIF28PB7ZC32 967 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 OLFM4Q6UX06 510 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 AIDAQ96BJ3 306 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 AGXT2Q9BYV1 514 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 C1orf167Q5SNV9 1468 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 TULP2O00295 520 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 YEATS4O95619 227 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 TCIRG1Q13488 830 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 ELF2Q15723 593 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 JMYQ8N9B5 988 aa19.04■□□□□ 0.64
CDC42EP4-201ENST00000335793 IARSP41252 1262 aaKnown RBP19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 CRYBG1Q9Y4K1 1723 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 A0A1W2PQ27 194 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 A0A1W2PQ64 194 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 A0A1W2PQD8 194 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 SLC20A2Q08357 652 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 VPS37DQ86XT2 251 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 DNAJC10Q8IXB1 793 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 CLIC6Q96NY7 704 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 INCENPQ9NQS7 918 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 PCDH11XQ9BZA7 1347 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 PCDH11YQ9BZA8 1340 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 CIAO1O76071 339 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 UBASH3AP57075 661 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 CCZ1BP86790 482 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms