RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 TCP10L2B9ZVM9 353 aa30.67■■■□□ 2.5
CDKN3-202ENST00000335183 FRAT2O75474 233 aaPredicted RBP30.67■■■□□ 2.5
CDKN3-202ENST00000335183 ANKRD44Q8N8A2 993 aa30.67■■■□□ 2.5
CDKN3-202ENST00000335183 ELP3Q9H9T3 547 aa30.67■■■□□ 2.5
CDKN3-202ENST00000335183 GRIK5Q16478 980 aa30.66■■■□□ 2.5
CDKN3-202ENST00000335183 CAVIN4Q5BKX8 364 aa30.66■■■□□ 2.5
CDKN3-202ENST00000335183 OTUD7BQ6GQQ9 843 aa30.66■■■□□ 2.5
CDKN3-202ENST00000335183 FBXO33Q7Z6M2 555 aa30.66■■■□□ 2.5
CDKN3-202ENST00000335183 TRIM17Q9Y577 477 aa30.66■■■□□ 2.5
CDKN3-202ENST00000335183 MYH13Q9UKX3 1938 aa30.66■■■□□ 2.5
CDKN3-202ENST00000335183 TNNI2P48788 182 aa30.65■■■□□ 2.5
CDKN3-202ENST00000335183 CDAN1Q8IWY9 1227 aa30.65■■■□□ 2.5
CDKN3-202ENST00000335183 KLHDC4Q8TBB5 520 aa30.65■■■□□ 2.5
CDKN3-202ENST00000335183 PTPRCP08575 1304 aa30.65■■■□□ 2.5
CDKN3-202ENST00000335183 OPTNQ96CV9 577 aa30.64■■■□□ 2.5
CDKN3-202ENST00000335183 TMEM39BQ9GZU3 492 aa30.64■■■□□ 2.5
CDKN3-202ENST00000335183 PDE8BO95263 885 aa30.63■■■□□ 2.49
CDKN3-202ENST00000335183 TBC1D22AQ8WUA7 517 aa30.63■■■□□ 2.49
CDKN3-202ENST00000335183 TEPSINQ96N21 525 aa30.63■■■□□ 2.49
CDKN3-202ENST00000335183 CRHR2Q13324 411 aa30.62■■■□□ 2.49
CDKN3-202ENST00000335183 OTOP1Q7RTM1 612 aa30.62■■■□□ 2.49
CDKN3-202ENST00000335183 VGLL2Q8N8G2 317 aa30.61■■■□□ 2.49
CDKN3-202ENST00000335183 SSH1Q8WYL5 1049 aa30.61■■■□□ 2.49
CDKN3-202ENST00000335183 BCAMP50895 628 aa30.6■■■□□ 2.49
CDKN3-202ENST00000335183 TEKT1Q969V4 418 aa30.6■■■□□ 2.49
CDKN3-202ENST00000335183 ERO1AQ96HE7 468 aa30.6■■■□□ 2.49
CDKN3-202ENST00000335183 PTPN18Q99952 460 aa30.6■■■□□ 2.49
CDKN3-202ENST00000335183 E9PSI1 815 aa30.59■■■□□ 2.49
CDKN3-202ENST00000335183 CACNB3P54284 484 aa30.59■■■□□ 2.49
CDKN3-202ENST00000335183 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.59■■■□□ 2.49
CDKN3-202ENST00000335183 CD99L2Q8TCZ2 262 aa30.59■■■□□ 2.49
CDKN3-202ENST00000335183 USP44Q9H0E7 712 aa30.59■■■□□ 2.49
CDKN3-202ENST00000335183 TESPA1A2RU30 521 aaPredicted RBP30.58■■■□□ 2.49
CDKN3-202ENST00000335183 HDLBPQ00341 1268 aaKnown RBP30.58■■■□□ 2.49
CDKN3-202ENST00000335183 CNKSR2Q8WXI2 1034 aa30.58■■■□□ 2.49
CDKN3-202ENST00000335183 IFIT1P09914 478 aaKnown RBP30.57■■■□□ 2.48
CDKN3-202ENST00000335183 MAP3K9P80192 1104 aa30.57■■■□□ 2.48
CDKN3-202ENST00000335183 VGLL4Q14135 290 aa30.57■■■□□ 2.48
CDKN3-202ENST00000335183 CSADQ9Y600 493 aa30.57■■■□□ 2.48
CDKN3-202ENST00000335183 PUM3Q15397 648 aaKnown RBP30.56■■■□□ 2.48
CDKN3-202ENST00000335183 PRPF38BQ5VTL8 546 aaKnown RBP30.56■■■□□ 2.48
CDKN3-202ENST00000335183 TMOD2Q9NZR1 351 aa30.56■■■□□ 2.48
CDKN3-202ENST00000335183 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.55■■■□□ 2.48
CDKN3-202ENST00000335183 MS4A4AQ96JQ5 239 aa30.55■■■□□ 2.48
CDKN3-202ENST00000335183 CCL15-CCL14A0A0B4J2E2 113 aa30.54■■■□□ 2.48
CDKN3-202ENST00000335183 SP3Q02447 781 aa30.54■■■□□ 2.48
CDKN3-202ENST00000335183 CCL15Q16663 113 aa30.54■■■□□ 2.48
CDKN3-202ENST00000335183 OTUD5Q96G74 571 aa30.54■■■□□ 2.48
CDKN3-202ENST00000335183 MAST3O60307 1309 aa30.53■■■□□ 2.48
CDKN3-202ENST00000335183 SLFN5Q08AF3 891 aa30.53■■■□□ 2.48
CDKN3-202ENST00000335183 BRI3BPQ8WY22 251 aa30.53■■■□□ 2.48
CDKN3-202ENST00000335183 ZDHHC15Q96MV8 337 aa30.53■■■□□ 2.48
CDKN3-202ENST00000335183 EFCC1Q9HA90 598 aa30.53■■■□□ 2.48
CDKN3-202ENST00000335183 PTPN22Q9Y2R2 807 aa30.53■■■□□ 2.48
CDKN3-202ENST00000335183 AK9Q5TCS8 1911 aa30.53■■■□□ 2.48
CDKN3-202ENST00000335183 EYA2O00167 538 aa30.52■■■□□ 2.48
CDKN3-202ENST00000335183 FGFR2P21802 821 aa30.52■■■□□ 2.48
CDKN3-202ENST00000335183 GTF2A2P52657 109 aa30.52■■■□□ 2.48
CDKN3-202ENST00000335183 KIF16BQ96L93 1317 aa30.51■■■□□ 2.48
CDKN3-202ENST00000335183 SLC5A1P13866 664 aa30.51■■■□□ 2.47
CDKN3-202ENST00000335183 TAF1CQ15572 869 aaPredicted RBP30.51■■■□□ 2.47
CDKN3-202ENST00000335183 RFX5P48382 616 aaPredicted RBP30.5■■■□□ 2.47
CDKN3-202ENST00000335183 APOBEC3HQ6NTF7 200 aaKnown RBP30.5■■■□□ 2.47
CDKN3-202ENST00000335183 MRIQ9BWK5 157 aa30.5■■■□□ 2.47
CDKN3-202ENST00000335183 SMC4Q9NTJ3 1288 aa30.5■■■□□ 2.47
CDKN3-202ENST00000335183 SUGT1Q9Y2Z0 365 aa30.5■■■□□ 2.47
CDKN3-202ENST00000335183 RBBP6Q7Z6E9 1792 aaKnown RBP30.49■■■□□ 2.47
CDKN3-202ENST00000335183 ALDH1L2Q3SY69 923 aa30.49■■■□□ 2.47
CDKN3-202ENST00000335183 INTS3Q68E01 1043 aaKnown RBP30.49■■■□□ 2.47
CDKN3-202ENST00000335183 FAM83AQ86UY5 434 aa30.49■■■□□ 2.47
CDKN3-202ENST00000335183 WRNIP1Q96S55 665 aa30.49■■■□□ 2.47
CDKN3-202ENST00000335183 ZFYVE28Q9HCC9 887 aa30.49■■■□□ 2.47
CDKN3-202ENST00000335183 LPIN2Q92539 896 aa30.48■■■□□ 2.47
CDKN3-202ENST00000335183 CDCA7LQ96GN5 454 aa30.48■■■□□ 2.47
CDKN3-202ENST00000335183 SNCAIPQ9Y6H5 919 aa30.48■■■□□ 2.47
CDKN3-202ENST00000335183 POTEFA5A3E0 1075 aa30.47■■■□□ 2.47
CDKN3-202ENST00000335183 SPDYE5A6NIY4 337 aa30.47■■■□□ 2.47
CDKN3-202ENST00000335183 CAP1Q01518 475 aa30.47■■■□□ 2.47
CDKN3-202ENST00000335183 HHIPL2Q6UWX4 724 aa30.47■■■□□ 2.47
CDKN3-202ENST00000335183 FAM43AQ8N2R8 423 aa30.47■■■□□ 2.47
CDKN3-202ENST00000335183 WDR66Q8TBY9 1149 aa30.47■■■□□ 2.47
CDKN3-202ENST00000335183 HOOK2Q96ED9 719 aa30.47■■■□□ 2.47
CDKN3-202ENST00000335183 FKBP1CQ5VVH2 108 aa30.46■■■□□ 2.47
CDKN3-202ENST00000335183 ZKSCAN4Q969J2 545 aaPredicted RBP30.46■■■□□ 2.47
CDKN3-202ENST00000335183 SIL1Q9H173 461 aa30.46■■■□□ 2.47
CDKN3-202ENST00000335183 ATG9AQ7Z3C6 839 aa30.45■■■□□ 2.47
CDKN3-202ENST00000335183 ERO1BQ86YB8 467 aa30.45■■■□□ 2.47
CDKN3-202ENST00000335183 UBTFL1P0CB47 393 aaPredicted RBP30.44■■■□□ 2.46
CDKN3-202ENST00000335183 DCAF15Q66K64 600 aa30.44■■■□□ 2.46
CDKN3-202ENST00000335183 RPAP1Q9BWH6 1393 aaPredicted RBP30.43■■■□□ 2.46
CDKN3-202ENST00000335183 CETPP11597 493 aa30.43■■■□□ 2.46
CDKN3-202ENST00000335183 KIAA0100Q14667 2235 aaKnown RBP30.43■■■□□ 2.46
CDKN3-202ENST00000335183 ZSWIM8A7E2V4 1837 aa30.43■■■□□ 2.46
CDKN3-202ENST00000335183 WDHD1O75717 1129 aaPredicted RBP30.42■■■□□ 2.46
CDKN3-202ENST00000335183 ARHGEF6Q15052 776 aa30.42■■■□□ 2.46
CDKN3-202ENST00000335183 ATP2B3Q16720 1220 aa30.42■■■□□ 2.46
CDKN3-202ENST00000335183 MIGA2Q7L4E1 593 aa30.42■■■□□ 2.46
CDKN3-202ENST00000335183 ARMC5Q96C12 935 aa30.42■■■□□ 2.46
CDKN3-202ENST00000335183 ZNF341Q9BYN7 854 aa30.42■■■□□ 2.46
CDKN3-202ENST00000335183 IRF6O14896 467 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms