RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ATP1A3P13637 1013 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 TDO2P48775 406 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 CASP7P55210 303 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 SAFBQ15424 915 aaKnown RBP eCLIP14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 VPS37DQ86XT2 251 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 ZBTB43O43298 467 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 PNOCQ13519 176 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 RBM43Q6ZSC3 357 aaKnown RBP14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 JMYQ8N9B5 988 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 GREM2Q9H772 168 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 TMEM94Q12767 1356 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 ANKRD18BA2A2Z9 1011 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 UBASH3AP57075 661 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 GSDMDP57764 484 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 LRP10Q7Z4F1 713 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 ILDR1Q86SU0 546 aaPredicted RBP14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 FMR1NBQ8N0W7 255 aaPredicted RBP14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 MNS1Q8NEH6 495 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 RTEL1Q9NZ71 1219 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
HMGCS1-201ENST00000325110 PCDH11XQ9BZA7 1347 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 PCDH11YQ9BZA8 1340 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 CTDSPL2Q05D32 466 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 TCIRG1Q13488 830 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 KRT40Q6A162 431 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 SLC12A7Q9Y666 1083 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 KIF13AQ9H1H9 1805 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 URI1O94763 535 aaPredicted RBP14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 IL2RBP14784 551 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 KLHL10Q6JEL2 608 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 CADPS2Q86UW7 1296 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 ABCF2Q9UG63 623 aa14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 ANGEL1Q9UNK9 670 aaKnown RBP14.9□□□□□ -0.02
HMGCS1-201ENST00000325110 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 STARD3NLO95772 234 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 CGNQ9P2M7 1197 aaKnown RBP14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 ZNF532Q9HCE3 1301 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 UBE2Q2LH0YL09 131 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 CDKL5O76039 1030 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 MIGA1Q8NAN2 632 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 FANCCQ00597 558 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 BRAPQ7Z569 592 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 ENGASEQ8NFI3 743 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 MPHOSPH8Q99549 860 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 SENP2Q9HC62 589 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 KCNJ14Q9UNX9 436 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 C1orf167Q5SNV9 1468 aa14.89□□□□□ -0.03
HMGCS1-201ENST00000325110 ERICH2A1L162 156 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 IRS4O14654 1257 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 MCAMP43121 646 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 PHKA1P46020 1223 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 ATL3Q6DD88 541 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 FER1L4A9Z1Z3 1794 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 PALLDQ8WX93 1383 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 AKAP17AQ02040 695 aaKnown RBP14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 YEATS4O95619 227 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 MAGEB6Q8N7X4 407 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 UTP14AQ9BVJ6 771 aaKnown RBP14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 ARMT1Q9H993 441 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 GPR108Q9NPR9 543 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 TUBGCP6Q96RT7 1819 aa14.88□□□□□ -0.03
HMGCS1-201ENST00000325110 ERICH4A6NGS2 130 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 MBD4O95243 580 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 ANTXR2P58335 489 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 TBC1D10CQ8IV04 446 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 WWC3Q9ULE0 1092 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 hCG_1642624A0A1W2PR95 340 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 SLU7O95391 586 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 HLFQ16534 295 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 MTMR7Q9Y216 660 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 MED1Q15648 1581 aaPredicted RBP14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 WDHD1O75717 1129 aaPredicted RBP14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 ERCC6LQ2NKX8 1250 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 CCDC102BQ68D86 513 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 SARM1Q6SZW1 724 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 CYB5R4Q7L1T6 521 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 TRMT44Q8IYL2 757 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 TRIM22Q8IYM9 498 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 CPLX3Q8WVH0 158 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 LRP2BPQ9P2M1 347 aa14.87□□□□□ -0.03
HMGCS1-201ENST00000325110 NLRP12P59046 1061 aa14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 CCZ1BP86790 482 aa14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 CCZ1P86791 482 aaPredicted RBP14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 SSRP1Q08945 709 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 MB21D2Q8IYB1 491 aaPredicted RBP14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 CDC25BP30305 580 aa14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 CCDC150Q8NCX0 1101 aa14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 PIH1D3Q9NQM4 214 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 KDM3BQ7LBC6 1761 aa14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 POLR3EQ9NVU0 708 aa14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 HPS5Q9UPZ3 1129 aa14.86□□□□□ -0.03
HMGCS1-201ENST00000325110 PES1O00541 588 aaKnown RBP14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 CDC27P30260 824 aa14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 SART3Q15020 963 aaKnown RBP14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 SLC4A8Q2Y0W8 1093 aa14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 APOA5Q6Q788 366 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms