RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 ZKSCAN3Q9BRR0 538 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 MYL10Q9BUA6 226 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 CNTNAP4Q9C0A0 1308 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.77■□□□□ 0.6
SHISA2-201ENST00000319420 CYP7A1P22680 504 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 RPS8P62241 208 aaKnown RBP18.77■□□□□ 0.6
SHISA2-201ENST00000319420 ANKRD36CQ5JPF3 1778 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 STRBPQ96SI9 672 aaKnown RBP18.77■□□□□ 0.6
SHISA2-201ENST00000319420 NBPF3Q9H094 633 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 SENP2Q9HC62 589 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 CTDNEP1O95476 244 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 PDCP20941 246 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 TDO2P48775 406 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 ADGRA1Q86SQ6 560 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 NCOA7Q8NI08 942 aa18.77■□□□□ 0.6
SHISA2-201ENST00000319420 FTOQ9C0B1 505 aaKnown RBP eCLIP18.77■□□□□ 0.6
SHISA2-201ENST00000319420 NWD2Q9ULI1 1742 aa18.77■□□□□ 0.59
SHISA2-201ENST00000319420 UBE3CQ15386 1083 aa18.76■□□□□ 0.59
SHISA2-201ENST00000319420 SLC4A4Q9Y6R1 1079 aa18.76■□□□□ 0.59
SHISA2-201ENST00000319420 TCRBV5S4A2TA0A5A2 114 aa18.76■□□□□ 0.59
SHISA2-201ENST00000319420 MINDY4BA8MYZ0 360 aa18.76■□□□□ 0.59
SHISA2-201ENST00000319420 MCM5P33992 734 aa18.76■□□□□ 0.59
SHISA2-201ENST00000319420 ANTXR2P58335 489 aa18.76■□□□□ 0.59
SHISA2-201ENST00000319420 NSUN7Q8NE18 718 aaKnown RBP18.76■□□□□ 0.59
SHISA2-201ENST00000319420 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
SHISA2-201ENST00000319420 MYO5AQ9Y4I1 1855 aaKnown RBP18.76■□□□□ 0.59
SHISA2-201ENST00000319420 CAVIN4Q5BKX8 364 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 ALDH8A1Q9H2A2 487 aaPredicted RBP18.75■□□□□ 0.59
SHISA2-201ENST00000319420 EPB41L4AQ9HCS5 686 aaPredicted RBP18.75■□□□□ 0.59
SHISA2-201ENST00000319420 UTRNP46939 3433 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 TXNRD3Q86VQ6 643 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 ANKIB1Q9P2G1 1089 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 PFKFB2O60825 505 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 TTC6Q86TZ1 520 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
SHISA2-201ENST00000319420 BSDC1Q9NW68 430 aaPredicted RBP18.75■□□□□ 0.59
SHISA2-201ENST00000319420 NFIXQ14938 502 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 CAMK4Q16566 473 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 NFXL1Q6ZNB6 911 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 IFNL3Q8IZI9 196 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 TMEM87AQ8NBN3 555 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 ZNF512BQ96KM6 892 aaPredicted RBP18.74■□□□□ 0.59
SHISA2-201ENST00000319420 NEDD4P46934 1319 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 CPLX1O14810 134 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 KRT85P78386 507 aa18.74■□□□□ 0.59
SHISA2-201ENST00000319420 SF3B3Q15393 1217 aaKnown RBP18.74■□□□□ 0.59
SHISA2-201ENST00000319420 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
SHISA2-201ENST00000319420 FAM84BQ96KN1 310 aaPredicted RBP18.73■□□□□ 0.59
SHISA2-201ENST00000319420 CYP2D7A0A087X1C5 515 aa18.73■□□□□ 0.59
SHISA2-201ENST00000319420 GOLGA6L4A6NEF3 574 aa18.73■□□□□ 0.59
SHISA2-201ENST00000319420 DYNLL1P63167 89 aaKnown RBP18.73■□□□□ 0.59
SHISA2-201ENST00000319420 GIMAP6Q6P9H5 292 aa18.73■□□□□ 0.59
SHISA2-201ENST00000319420 MB21D2Q8IYB1 491 aaPredicted RBP18.73■□□□□ 0.59
SHISA2-201ENST00000319420 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
SHISA2-201ENST00000319420 SPEF2Q9C093 1822 aa18.73■□□□□ 0.59
SHISA2-201ENST00000319420 AKAP11Q9UKA4 1901 aa18.73■□□□□ 0.59
SHISA2-201ENST00000319420 ADD1P35611 737 aaKnown RBP18.72■□□□□ 0.59
SHISA2-201ENST00000319420 CNBD1Q8NA66 436 aa18.72■□□□□ 0.59
SHISA2-201ENST00000319420 SPATA32Q96LK8 384 aa18.72■□□□□ 0.59
SHISA2-201ENST00000319420 GNL3LQ9NVN8 582 aaKnown RBP18.72■□□□□ 0.59
SHISA2-201ENST00000319420 UBE2HP62256 183 aa18.71■□□□□ 0.59
SHISA2-201ENST00000319420 RC3H1Q5TC82 1133 aaKnown RBP18.71■□□□□ 0.59
SHISA2-201ENST00000319420 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
SHISA2-201ENST00000319420 GSG1L2A8MUP6 293 aa18.71■□□□□ 0.59
SHISA2-201ENST00000319420 PRDM1O75626 825 aa18.71■□□□□ 0.59
SHISA2-201ENST00000319420 GLIPR1L2Q4G1C9 344 aa18.71■□□□□ 0.59
SHISA2-201ENST00000319420 MPNDQ8N594 471 aa18.71■□□□□ 0.59
SHISA2-201ENST00000319420 TRIM44Q96DX7 344 aaPredicted RBP18.71■□□□□ 0.59
SHISA2-201ENST00000319420 AIFM3Q96NN9 605 aa18.71■□□□□ 0.59
SHISA2-201ENST00000319420 PATL2C9JE40 543 aaKnown RBP18.7■□□□□ 0.58
SHISA2-201ENST00000319420 POLR3DP05423 398 aaPredicted RBP18.7■□□□□ 0.58
SHISA2-201ENST00000319420 PLCB2Q00722 1185 aa18.7■□□□□ 0.58
SHISA2-201ENST00000319420 CCDC173Q0VFZ6 552 aa18.7■□□□□ 0.58
SHISA2-201ENST00000319420 PHKBQ93100 1093 aa18.7■□□□□ 0.58
SHISA2-201ENST00000319420 TACC3Q9Y6A5 838 aa18.7■□□□□ 0.58
SHISA2-201ENST00000319420 UBE2Q2LH0YL09 131 aa18.7■□□□□ 0.58
SHISA2-201ENST00000319420 EVX2Q03828 476 aa18.7■□□□□ 0.58
SHISA2-201ENST00000319420 CMTR1Q8N1G2 835 aaKnown RBP18.7■□□□□ 0.58
SHISA2-201ENST00000319420 ANP32BQ92688 251 aaKnown RBP18.7■□□□□ 0.58
SHISA2-201ENST00000319420 SYAP1Q96A49 352 aaPredicted RBP18.7■□□□□ 0.58
SHISA2-201ENST00000319420 PRDX5P30044 214 aa18.69■□□□□ 0.58
SHISA2-201ENST00000319420 LAMA4Q16363 1823 aa18.69■□□□□ 0.58
SHISA2-201ENST00000319420 ESPNB1AK53 854 aa18.69■□□□□ 0.58
SHISA2-201ENST00000319420 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
SHISA2-201ENST00000319420 ZSWIM5Q9P217 1185 aa18.69■□□□□ 0.58
SHISA2-201ENST00000319420 IFIT3O14879 490 aaKnown RBP18.68■□□□□ 0.58
SHISA2-201ENST00000319420 LIG1P18858 919 aa18.68■□□□□ 0.58
SHISA2-201ENST00000319420 UBE4AQ14139 1066 aa18.68■□□□□ 0.58
SHISA2-201ENST00000319420 BICD2Q8TD16 824 aa18.68■□□□□ 0.58
SHISA2-201ENST00000319420 ORC3Q9UBD5 711 aaPredicted RBP18.68■□□□□ 0.58
SHISA2-201ENST00000319420 BTAF1O14981 1849 aa18.68■□□□□ 0.58
SHISA2-201ENST00000319420 FDPSP14324 419 aaKnown RBP18.68■□□□□ 0.58
SHISA2-201ENST00000319420 NAA16Q6N069 864 aaPredicted RBP18.68■□□□□ 0.58
SHISA2-201ENST00000319420 TSPY26PQ9H489 355 aa18.68■□□□□ 0.58
SHISA2-201ENST00000319420 AATFQ9NY61 560 aaKnown RBP eCLIP18.68■□□□□ 0.58
SHISA2-201ENST00000319420 HPS5Q9UPZ3 1129 aa18.68■□□□□ 0.58
SHISA2-201ENST00000319420 DDX60Q8IY21 1712 aaKnown RBP18.68■□□□□ 0.58
SHISA2-201ENST00000319420 MAGEB6P1A0A0J9YX57 407 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms