RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 IGSF3O75054 1194 aa12.1□□□□□ -0.47
GINS3-201ENST00000318129 CYP2E1P05181 493 aaPredicted RBP12.1□□□□□ -0.47
GINS3-201ENST00000318129 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
GINS3-201ENST00000318129 LTBP1Q14766 1721 aa12.1□□□□□ -0.47
GINS3-201ENST00000318129 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
GINS3-201ENST00000318129 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
GINS3-201ENST00000318129 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
GINS3-201ENST00000318129 SGSM2O43147 1006 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 BAG4O95429 457 aaKnown RBP12.09□□□□□ -0.47
GINS3-201ENST00000318129 KLRK1P26718 216 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 CWC27Q6UX04 472 aaKnown RBP12.09□□□□□ -0.47
GINS3-201ENST00000318129 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 RTKN2Q8IZC4 609 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 MYRIPQ8NFW9 859 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
GINS3-201ENST00000318129 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
GINS3-201ENST00000318129 ZSCAN23Q3MJ62 389 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 DALRD3Q5D0E6 543 aaKnown RBP12.09□□□□□ -0.47
GINS3-201ENST00000318129 PI16Q6UXB8 463 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 TXNRD3Q86VQ6 643 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 TDRD7Q8NHU6 1098 aaKnown RBP12.09□□□□□ -0.47
GINS3-201ENST00000318129 HELLSQ9NRZ9 838 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 TMEM51Q9NW97 253 aa12.09□□□□□ -0.47
GINS3-201ENST00000318129 IL1R1P14778 569 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 MAP3K12Q12852 859 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 NMIQ13287 307 aaPredicted RBP12.08□□□□□ -0.48
GINS3-201ENST00000318129 CCDC93Q567U6 631 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 TMED8Q6PL24 325 aaPredicted RBP12.08□□□□□ -0.48
GINS3-201ENST00000318129 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 KIF2CQ99661 725 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 COA1Q9GZY4 146 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 PPP1R1BQ9UD71 204 aaPredicted RBP12.08□□□□□ -0.48
GINS3-201ENST00000318129 ZMYM1Q5SVZ6 1142 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
GINS3-201ENST00000318129 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 CD209Q9NNX6 404 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 PIH1D3Q9NQM4 214 aaKnown RBP12.08□□□□□ -0.48
GINS3-201ENST00000318129 CCDC39Q9UFE4 941 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
GINS3-201ENST00000318129 C21orf2O43822 256 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 CD2BP2O95400 341 aaKnown RBP12.07□□□□□ -0.48
GINS3-201ENST00000318129 CBX1P83916 185 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 UBE3CQ15386 1083 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
GINS3-201ENST00000318129 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
GINS3-201ENST00000318129 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
GINS3-201ENST00000318129 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 G3V3G9 751 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
GINS3-201ENST00000318129 IDH1O75874 414 aaKnown RBP12.07□□□□□ -0.48
GINS3-201ENST00000318129 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
GINS3-201ENST00000318129 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 VPS33BQ9H267 617 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
GINS3-201ENST00000318129 MYH13Q9UKX3 1938 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 SALL1Q9NSC2 1324 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 ADD2P35612 726 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
GINS3-201ENST00000318129 FAM227BQ96M60 508 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 PSMD1Q99460 953 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 MYH7P12883 1935 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 DUOX1Q9NRD9 1551 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 A0A0D9SFI3 127 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 MCCP23508 829 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.48
GINS3-201ENST00000318129 SLC9C2Q5TAH2 1124 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 APPBP2Q92624 585 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
GINS3-201ENST00000318129 SNED1Q8TER0 1413 aa12.05□□□□□ -0.48
GINS3-201ENST00000318129 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
GINS3-201ENST00000318129 PODNQ7Z5L7 613 aa12.05□□□□□ -0.48
GINS3-201ENST00000318129 TBC1D22AQ8WUA7 517 aa12.05□□□□□ -0.48
GINS3-201ENST00000318129 LMBRD1Q9NUN5 540 aa12.05□□□□□ -0.48
GINS3-201ENST00000318129 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
GINS3-201ENST00000318129 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
GINS3-201ENST00000318129 DOCK2Q92608 1830 aa12.05□□□□□ -0.48
GINS3-201ENST00000318129 PDE6AP16499 860 aa12.04□□□□□ -0.48
GINS3-201ENST00000318129 IPO4Q8TEX9 1081 aaKnown RBP12.04□□□□□ -0.48
GINS3-201ENST00000318129 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
GINS3-201ENST00000318129 RAI14Q9P0K7 980 aa12.04□□□□□ -0.48
GINS3-201ENST00000318129 BRCA1P38398 1863 aaKnown RBP12.04□□□□□ -0.48
GINS3-201ENST00000318129 COL1A1P02452 1464 aaPredicted RBP12.04□□□□□ -0.48
GINS3-201ENST00000318129 KIAA2012Q0VF49 1180 aa12.04□□□□□ -0.48
GINS3-201ENST00000318129 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
GINS3-201ENST00000318129 CCDC171Q6TFL3 1326 aa12.04□□□□□ -0.48
GINS3-201ENST00000318129 TAF3Q5VWG9 929 aa12.03□□□□□ -0.48
GINS3-201ENST00000318129 MAGEB6Q8N7X4 407 aa12.03□□□□□ -0.48
GINS3-201ENST00000318129 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
GINS3-201ENST00000318129 TCRBV5S4A2TA0A5A2 114 aa12.03□□□□□ -0.48
GINS3-201ENST00000318129 HMGN5P82970 282 aaKnown RBP12.03□□□□□ -0.48
GINS3-201ENST00000318129 OSBP2Q969R2 916 aa12.03□□□□□ -0.48
GINS3-201ENST00000318129 IL25Q9H293 177 aa12.03□□□□□ -0.48
GINS3-201ENST00000318129 SUGT1Q9Y2Z0 365 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms