RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 YEATS4O95619 227 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 TOGARAM2Q6ZUX3 1019 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 CCDC12Q8WUD4 166 aaPredicted RBP16.91■□□□□ 0.3
COL6A2-202ENST00000310645 CLIC6Q96NY7 704 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 COPRSQ9NQ92 184 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
COL6A2-202ENST00000310645 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
COL6A2-202ENST00000310645 AXDND1Q5T1B0 1012 aaPredicted RBP16.91■□□□□ 0.3
COL6A2-202ENST00000310645 VSTM4Q8IW00 320 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 GPR161Q8N6U8 529 aaKnown RBP16.91■□□□□ 0.3
COL6A2-202ENST00000310645 DHX58Q96C10 678 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 POLR3EQ9NVU0 708 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
COL6A2-202ENST00000310645 ADAM21Q9UKJ8 722 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 UTYO14607 1347 aa16.91■□□□□ 0.3
COL6A2-202ENST00000310645 PSME1Q06323 249 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 AK7Q96M32 723 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 TSPYL1Q9H0U9 437 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 IKBKBO14920 756 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 CMA1P23946 247 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 PDIA6Q15084 440 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 WASHC4Q2M389 1173 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 SPECC1Q5M775 1068 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 A0A087WZG4 1122 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 ARHGAP6O43182 974 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 RXRAP19793 462 aa16.9■□□□□ 0.3
COL6A2-202ENST00000310645 FKBP4Q02790 459 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL6A2-202ENST00000310645 LMBR1LQ6UX01 489 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 RASSF4Q9H2L5 321 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 LZTFL1Q9NQ48 299 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 LONRF2Q1L5Z9 754 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 VPS18Q9P253 973 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 H3BQF6 201 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 MYO1CO00159 1063 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 ANKRD13DQ6ZTN6 518 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 FUT8Q9BYC5 575 aa16.89■□□□□ 0.29
COL6A2-202ENST00000310645 PRC1O43663 620 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 RFX5P48382 616 aaPredicted RBP16.88■□□□□ 0.29
COL6A2-202ENST00000310645 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 SLC20A2Q08357 652 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 AGXT2Q9BYV1 514 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 PIK3C2AO00443 1686 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 TOPAZ1Q8N9V7 1692 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 METTL22Q9BUU2 404 aaPredicted RBP16.88■□□□□ 0.29
COL6A2-202ENST00000310645 RGPD8O14715 1765 aaPredicted RBP16.88■□□□□ 0.29
COL6A2-202ENST00000310645 MAST3O60307 1309 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
COL6A2-202ENST00000310645 FOXN1O15353 648 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
COL6A2-202ENST00000310645 GOLGA1Q92805 767 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 PCDHA5Q9Y5H7 936 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 MRFAP1Q9Y605 127 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 ATP8B1O43520 1251 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
COL6A2-202ENST00000310645 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
COL6A2-202ENST00000310645 MTF1Q14872 753 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 CNNM3Q8NE01 707 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 PDE11AQ9HCR9 933 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 CWC15Q9P013 229 aaKnown RBP16.87■□□□□ 0.29
COL6A2-202ENST00000310645 M0R2C6 588 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 PDE4BQ07343 736 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 ZNF827Q17R98 1081 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 INTS13Q9NVM9 706 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
COL6A2-202ENST00000310645 DHX16O60231 1041 aaKnown RBP16.86■□□□□ 0.29
COL6A2-202ENST00000310645 PHACTR2O75167 634 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 CDC27P30260 824 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 LONRF3Q496Y0 759 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 ZMYM1Q5SVZ6 1142 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 SLC39A14Q15043 492 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 SKIDA1Q1XH10 827 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 TMEM139Q8IV31 216 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 UBXN6Q9BZV1 441 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 MUM1L1Q5H9M0 696 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 SUGCTQ9HAC7 445 aa16.86■□□□□ 0.29
COL6A2-202ENST00000310645 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
COL6A2-202ENST00000310645 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
COL6A2-202ENST00000310645 RABGGTAQ92696 567 aa16.85■□□□□ 0.29
COL6A2-202ENST00000310645 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
COL6A2-202ENST00000310645 RNF113AO15541 343 aaKnown RBP16.85■□□□□ 0.29
COL6A2-202ENST00000310645 RSRC2Q7L4I2 434 aaKnown RBP16.85■□□□□ 0.29
COL6A2-202ENST00000310645 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
COL6A2-202ENST00000310645 CHMP4CQ96CF2 233 aa16.85■□□□□ 0.29
COL6A2-202ENST00000310645 AGLP35573 1532 aa16.85■□□□□ 0.29
COL6A2-202ENST00000310645 TFRCP02786 760 aaKnown RBP16.84■□□□□ 0.29
COL6A2-202ENST00000310645 PHKBQ93100 1093 aa16.84■□□□□ 0.29
COL6A2-202ENST00000310645 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
COL6A2-202ENST00000310645 ALG1Q9BT22 464 aa16.84■□□□□ 0.29
COL6A2-202ENST00000310645 TXLNAP40222 546 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms