RNA–Protein interactions for RNA: ENST00000309157.8

RORA-202, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-202ENST00000309157 CCDC158Q5M9N0 1113 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 SULT6B1Q6IMI4 303 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 LRRC31Q6UY01 552 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 NLGN2Q8NFZ4 835 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 CABS1Q96KC9 395 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 SUN2Q9UH99 717 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 BLOC1S6Q9UL45 172 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 ODF2LQ9ULJ1 636 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 C4BP0C0L5 1744 aa9.49□□□□□ -0.89
RORA-202ENST00000309157 CASTP20810 708 aaKnown RBP9.48□□□□□ -0.89
RORA-202ENST00000309157 PTGS1P23219 599 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 IL13P35225 146 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 RASA3Q14644 834 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 HHATQ5VTY9 493 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 RCSD1Q6JBY9 416 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 UBA5Q9GZZ9 404 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 BATF3Q9NR55 127 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 WWC3Q9ULE0 1092 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 MYO6Q9UM54 1294 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.48□□□□□ -0.89
RORA-202ENST00000309157 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
RORA-202ENST00000309157 YY1P25490 414 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 GCKP35557 465 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 ARHGAP29Q52LW3 1261 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 WLSQ5T9L3 541 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 CPLX2Q6PUV4 134 aaKnown RBP9.48□□□□□ -0.89
RORA-202ENST00000309157 SDCCAG8Q86SQ7 713 aaPredicted RBP9.48□□□□□ -0.89
RORA-202ENST00000309157 UBXN4Q92575 508 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 JPH2Q9BR39 696 aaPredicted RBP9.48□□□□□ -0.89
RORA-202ENST00000309157 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 UBR3Q6ZT12 1888 aa9.48□□□□□ -0.89
RORA-202ENST00000309157 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 EPB41L2O43491 1005 aaKnown RBP9.47□□□□□ -0.89
RORA-202ENST00000309157 MX1P20591 662 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 NAP1L1P55209 391 aaKnown RBP9.47□□□□□ -0.89
RORA-202ENST00000309157 SIK1P57059 783 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 ZSCAN25Q6NSZ9 544 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 KCNV1Q6PIU1 500 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 PRPF38AQ8NAV1 312 aaKnown RBP9.47□□□□□ -0.89
RORA-202ENST00000309157 SNRNP27Q8WVK2 155 aaKnown RBP9.47□□□□□ -0.89
RORA-202ENST00000309157 PLEKHG4BQ96PX9 1271 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 RMI1Q9H9A7 625 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 ORC3Q9UBD5 711 aaPredicted RBP9.47□□□□□ -0.89
RORA-202ENST00000309157 ATXN2Q99700 1313 aaKnown RBP9.47□□□□□ -0.89
RORA-202ENST00000309157 COL24A1Q17RW2 1714 aa9.47□□□□□ -0.89
RORA-202ENST00000309157 CDC25BP30305 580 aa9.46□□□□□ -0.89
RORA-202ENST00000309157 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.89
RORA-202ENST00000309157 WDR43Q15061 677 aaKnown RBP eCLIP9.46□□□□□ -0.89
RORA-202ENST00000309157 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.89
RORA-202ENST00000309157 NBPF15Q8N660 670 aa9.46□□□□□ -0.89
RORA-202ENST00000309157 SAAL1Q96ER3 474 aa9.46□□□□□ -0.89
RORA-202ENST00000309157 CCDC34Q96HJ3 373 aa9.46□□□□□ -0.89
RORA-202ENST00000309157 STK31Q9BXU1 1019 aa9.46□□□□□ -0.89
RORA-202ENST00000309157 NSFL1CQ9UNZ2 370 aaKnown RBP9.46□□□□□ -0.89
RORA-202ENST00000309157 COG6Q9Y2V7 657 aa9.46□□□□□ -0.89
RORA-202ENST00000309157 H7C1W4 665 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 AP1G2O75843 785 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 CD2BP2O95400 341 aaKnown RBP9.46□□□□□ -0.9
RORA-202ENST00000309157 ECEL1O95672 775 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 TBC1D8O95759 1140 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.9
RORA-202ENST00000309157 RAB27AP51159 221 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 TMED1Q13445 227 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 ERCC6LQ2NKX8 1250 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 IQCA1Q86XH1 822 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 TMEM87AQ8NBN3 555 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 MIPOL1Q8TD10 442 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 C17orf50Q8WW18 174 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 AGAP3Q96P47 875 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 SLX1AQ9BQ83 275 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
RORA-202ENST00000309157 LGR6Q9HBX8 967 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 ARFGAP3Q9NP61 516 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.98e-7■■□□□ 12.8
RORA-202ENST00000309157 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.46□□□□□ -0.9
RORA-202ENST00000309157 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
RORA-202ENST00000309157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.45□□□□□ -0.9
RORA-202ENST00000309157 CLNS1AP54105 237 aaKnown RBP9.45□□□□□ -0.9
RORA-202ENST00000309157 DHX8Q14562 1220 aaKnown RBP9.45□□□□□ -0.9
RORA-202ENST00000309157 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
RORA-202ENST00000309157 BMP2KLQ5H9B9 411 aa9.45□□□□□ -0.9
RORA-202ENST00000309157 CCDC50Q8IVM0 306 aa9.45□□□□□ -0.9
RORA-202ENST00000309157 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
RORA-202ENST00000309157 SPC24Q8NBT2 197 aa9.45□□□□□ -0.9
RORA-202ENST00000309157 KAT2BQ92831 832 aa9.45□□□□□ -0.9
RORA-202ENST00000309157 SYNPO2Q9UMS6 1093 aa9.45□□□□□ -0.9
RORA-202ENST00000309157 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
RORA-202ENST00000309157 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.45□□□□□ -0.9
RORA-202ENST00000309157 MYH14Q7Z406 1995 aaKnown RBP9.45□□□□□ -0.9
RORA-202ENST00000309157 SRGAP3O43295 1099 aa9.44□□□□□ -0.9
RORA-202ENST00000309157 TPD52L2O43399 206 aaKnown RBP9.44□□□□□ -0.9
RORA-202ENST00000309157 PTCD1O75127 700 aaKnown RBP9.44□□□□□ -0.9
RORA-202ENST00000309157 RTN3O95197 1032 aaPredicted RBP9.44□□□□□ -0.9
RORA-202ENST00000309157 OATP04181 439 aa9.44□□□□□ -0.9
RORA-202ENST00000309157 ALDH1B1P30837 517 aa9.44□□□□□ -0.9
RORA-202ENST00000309157 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
RORA-202ENST00000309157 CCDC178Q5BJE1 867 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms