RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 UQCRFS1P1P0C7P4 283 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 TTF1Q15361 905 aaPredicted RBP17.31■□□□□ 0.36
LEMD3-201ENST00000308330 TUBB8Q3ZCM7 444 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 CKAP2LQ8IYA6 745 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 RMI1Q9H9A7 625 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 BAIAP2L1Q9UHR4 511 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 UBE2HP62256 183 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 PPP2R3AQ06190 1150 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 ERCC6LQ2NKX8 1250 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 FBF1Q8TES7 1133 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 ROBO2Q9HCK4 1378 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 ELF1P32519 619 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 IL15P40933 162 aaPredicted RBP17.3■□□□□ 0.36
LEMD3-201ENST00000308330 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
LEMD3-201ENST00000308330 PTPRTO14522 1441 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
LEMD3-201ENST00000308330 ATP8B1O43520 1251 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 MYO1BO43795 1136 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 CDKL5O76039 1030 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 SLFN14P0C7P3 912 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 TMEM132AQ24JP5 1023 aa17.3■□□□□ 0.36
LEMD3-201ENST00000308330 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
LEMD3-201ENST00000308330 IQCGQ9H095 443 aaKnown RBP17.3■□□□□ 0.36
LEMD3-201ENST00000308330 HSF2BPO75031 334 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 TMC6Q7Z403 805 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 CCDC82Q8N4S0 544 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.29■□□□□ 0.368e-7■■■■■ 376.6
LEMD3-201ENST00000308330 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 NLRP1Q9C000 1473 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 KIAA0232Q92628 1395 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 LUC7L3O95232 432 aaKnown RBP17.29■□□□□ 0.36
LEMD3-201ENST00000308330 SESN3P58005 492 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 PA2G4Q9UQ80 394 aaKnown RBP17.29■□□□□ 0.36
LEMD3-201ENST00000308330 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 CTAGE15A4D2H0 777 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 CTAGE8P0CG41 777 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 NCBP1Q09161 790 aaKnown RBP17.29■□□□□ 0.36
LEMD3-201ENST00000308330 KLHL10Q6JEL2 608 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 CTAGE6Q86UF2 777 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 CTAGE4Q8IX94 777 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 TSC22D3Q99576 134 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 ANO10Q9NW15 660 aa17.29■□□□□ 0.36
LEMD3-201ENST00000308330 KRT18P05783 430 aaKnown RBP17.28■□□□□ 0.36
LEMD3-201ENST00000308330 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 SEC24BO95487 1268 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 CHRM1P11229 460 aaPredicted RBP17.28■□□□□ 0.36
LEMD3-201ENST00000308330 SLC4A8Q2Y0W8 1093 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 EVI5LQ96CN4 794 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 CA8P35219 290 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.28■□□□□ 0.36
LEMD3-201ENST00000308330 DDX12PQ92771 950 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 LACTBP83111 547 aaPredicted RBP17.28■□□□□ 0.36
LEMD3-201ENST00000308330 ANKS4BQ8N8V4 417 aa17.28■□□□□ 0.36
LEMD3-201ENST00000308330 SPDL1Q96EA4 605 aa17.27■□□□□ 0.36
LEMD3-201ENST00000308330 CCDC87Q9NVE4 849 aa17.27■□□□□ 0.36
LEMD3-201ENST00000308330 CCDC96Q2M329 555 aa17.27■□□□□ 0.36
LEMD3-201ENST00000308330 RNF41Q9H4P4 317 aaPredicted RBP17.27■□□□□ 0.36
LEMD3-201ENST00000308330 FAM114A2Q9NRY5 505 aa17.27■□□□□ 0.35
LEMD3-201ENST00000308330 G3BP2Q9UN86 482 aaKnown RBP17.27■□□□□ 0.35
LEMD3-201ENST00000308330 TOP1P11387 765 aaKnown RBP17.27■□□□□ 0.35
LEMD3-201ENST00000308330 ZNF76P36508 570 aa17.27■□□□□ 0.35
LEMD3-201ENST00000308330 SPATS2Q86XZ4 545 aaKnown RBP17.27■□□□□ 0.35
LEMD3-201ENST00000308330 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.35
LEMD3-201ENST00000308330 ZNF396Q96N95 335 aaPredicted RBP17.27■□□□□ 0.35
LEMD3-201ENST00000308330 KDM6BO15054 1643 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 DIXDC1Q155Q3 683 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 JMYQ8N9B5 988 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 RABEP2Q9H5N1 569 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 HDAC9Q9UKV0 1011 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 E2F5Q15329 346 aa17.26■□□□□ 0.35
LEMD3-201ENST00000308330 RBM26Q5T8P6 1007 aaKnown RBP17.26■□□□□ 0.35
LEMD3-201ENST00000308330 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.25■□□□□ 0.35
LEMD3-201ENST00000308330 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 G2E3Q7L622 706 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 HAND2P61296 217 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 PARP10Q53GL7 1025 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
LEMD3-201ENST00000308330 CABP5Q9NP86 173 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
LEMD3-201ENST00000308330 HECW2Q9P2P5 1572 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 CYP7A1P22680 504 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
LEMD3-201ENST00000308330 CARD6Q9BX69 1037 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 ELP1O95163 1332 aa17.25■□□□□ 0.35
LEMD3-201ENST00000308330 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
LEMD3-201ENST00000308330 RXRBP28702 533 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 MAP7Q14244 749 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 ZHX3Q9H4I2 956 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 MMP14P50281 582 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 CHL1O00533 1208 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms