RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 ATP2B3Q16720 1220 aa19.38■□□□□ 0.69
SCAND1-201ENST00000305978 SPDYE2Q495Y8 402 aa19.38■□□□□ 0.69
SCAND1-201ENST00000305978 AK9Q5TCS8 1911 aa19.38■□□□□ 0.69
SCAND1-201ENST00000305978 VEZTQ9HBM0 779 aa19.38■□□□□ 0.69
SCAND1-201ENST00000305978 SRGAP3O43295 1099 aa19.37■□□□□ 0.69
SCAND1-201ENST00000305978 HDLBPQ00341 1268 aaKnown RBP19.37■□□□□ 0.69
SCAND1-201ENST00000305978 ARMC9Q7Z3E5 817 aa19.37■□□□□ 0.69
SCAND1-201ENST00000305978 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
SCAND1-201ENST00000305978 GNAI2P04899 355 aa19.36■□□□□ 0.69
SCAND1-201ENST00000305978 PRKG1Q13976 671 aa19.36■□□□□ 0.69
SCAND1-201ENST00000305978 TMEM57Q8N5G2 664 aa19.36■□□□□ 0.69
SCAND1-201ENST00000305978 TDRD3Q9H7E2 651 aaKnown RBP19.36■□□□□ 0.69
SCAND1-201ENST00000305978 ZNF70Q9UC06 446 aaPredicted RBP19.36■□□□□ 0.69
SCAND1-201ENST00000305978 CSRNP1Q96S65 589 aa19.35■□□□□ 0.69
SCAND1-201ENST00000305978 ANGEL1Q9UNK9 670 aaKnown RBP19.35■□□□□ 0.69
SCAND1-201ENST00000305978 SUGT1Q9Y2Z0 365 aa19.35■□□□□ 0.69
SCAND1-201ENST00000305978 MAST3O60307 1309 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 TNFAIP1Q13829 316 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 RASA3Q14644 834 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 LDLRAD1Q5T700 205 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 REM2Q8IYK8 340 aaPredicted RBP19.34■□□□□ 0.69
SCAND1-201ENST00000305978 WDR66Q8TBY9 1149 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 TEKT1Q969V4 418 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 SAGE1Q9NXZ1 904 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 FZD1Q9UP38 647 aa19.34■□□□□ 0.69
SCAND1-201ENST00000305978 CAPN15O75808 1086 aa19.33■□□□□ 0.68
SCAND1-201ENST00000305978 MAP3K11Q16584 847 aa19.33■□□□□ 0.68
SCAND1-201ENST00000305978 SUPT20HL1Q3ZLR7 823 aa19.33■□□□□ 0.68
SCAND1-201ENST00000305978 NBPF12Q5TAG4 269 aaPredicted RBP19.33■□□□□ 0.68
SCAND1-201ENST00000305978 MRIQ9BWK5 157 aa19.33■□□□□ 0.68
SCAND1-201ENST00000305978 GNL3LQ9NVN8 582 aaKnown RBP19.33■□□□□ 0.68
SCAND1-201ENST00000305978 PPP1R12BO60237 982 aaPredicted RBP19.32■□□□□ 0.68
SCAND1-201ENST00000305978 PHKA1P46020 1223 aa19.32■□□□□ 0.68
SCAND1-201ENST00000305978 ZDHHC15Q96MV8 337 aa19.32■□□□□ 0.68
SCAND1-201ENST00000305978 RNF186Q9NXI6 227 aa19.32■□□□□ 0.68
SCAND1-201ENST00000305978 DOCK2Q92608 1830 aa19.31■□□□□ 0.68
SCAND1-201ENST00000305978 PNMA6EA0A0J9YXQ4 647 aa19.31■□□□□ 0.68
SCAND1-201ENST00000305978 SEMA3EO15041 775 aa19.31■□□□□ 0.68
SCAND1-201ENST00000305978 ZBTB22O15209 634 aa19.31■□□□□ 0.68
SCAND1-201ENST00000305978 ADORA1P30542 326 aa19.31■□□□□ 0.68
SCAND1-201ENST00000305978 TFCP2Q12800 502 aa19.31■□□□□ 0.68
SCAND1-201ENST00000305978 HHIPL2Q6UWX4 724 aa19.31■□□□□ 0.68
SCAND1-201ENST00000305978 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
SCAND1-201ENST00000305978 MYO5AQ9Y4I1 1855 aaKnown RBP19.31■□□□□ 0.68
SCAND1-201ENST00000305978 TCP10L2B9ZVM9 353 aa19.3■□□□□ 0.68
SCAND1-201ENST00000305978 TRPA1O75762 1119 aa19.3■□□□□ 0.68
SCAND1-201ENST00000305978 TEPSINQ96N21 525 aa19.3■□□□□ 0.68
SCAND1-201ENST00000305978 DENND2AQ9ULE3 1009 aa19.3■□□□□ 0.68
SCAND1-201ENST00000305978 SALL1Q9NSC2 1324 aa19.29■□□□□ 0.68
SCAND1-201ENST00000305978 A0A1B0GUL7 405 aa19.29■□□□□ 0.68
SCAND1-201ENST00000305978 RLBP1P12271 317 aa19.29■□□□□ 0.68
SCAND1-201ENST00000305978 TNNI2P48788 182 aa19.29■□□□□ 0.68
SCAND1-201ENST00000305978 TIMM10P62072 90 aa19.29■□□□□ 0.68
SCAND1-201ENST00000305978 CCDC102BQ68D86 513 aa19.29■□□□□ 0.68
SCAND1-201ENST00000305978 APOBEC3HQ6NTF7 200 aaKnown RBP19.29■□□□□ 0.68
SCAND1-201ENST00000305978 AKAP2Q9Y2D5 859 aa19.29■□□□□ 0.68
SCAND1-201ENST00000305978 UNCXA6NJT0 531 aa19.28■□□□□ 0.68
SCAND1-201ENST00000305978 USP2O75604 605 aaPredicted RBP19.28■□□□□ 0.68
SCAND1-201ENST00000305978 PRDX5P30044 214 aa19.28■□□□□ 0.68
SCAND1-201ENST00000305978 IREB2P48200 963 aaKnown RBP19.28■□□□□ 0.68
SCAND1-201ENST00000305978 CACNB3P54284 484 aa19.28■□□□□ 0.68
SCAND1-201ENST00000305978 MKRN3Q13064 507 aaKnown RBP19.28■□□□□ 0.68
SCAND1-201ENST00000305978 SPRYD7Q5W111 196 aa19.28■□□□□ 0.68
SCAND1-201ENST00000305978 CDAN1Q8IWY9 1227 aa19.28■□□□□ 0.68
SCAND1-201ENST00000305978 CLMNQ96JQ2 1002 aa19.28■□□□□ 0.68
SCAND1-201ENST00000305978 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
SCAND1-201ENST00000305978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.28■□□□□ 0.68
SCAND1-201ENST00000305978 TM4SF4P48230 202 aa19.27■□□□□ 0.68
SCAND1-201ENST00000305978 FKBP1CQ5VVH2 108 aa19.27■□□□□ 0.68
SCAND1-201ENST00000305978 ITPRIPQ8IWB1 547 aa19.27■□□□□ 0.68
SCAND1-201ENST00000305978 SLC10A4Q96EP9 437 aa19.27■□□□□ 0.68
SCAND1-201ENST00000305978 XAGE2Q96GT9 111 aa19.27■□□□□ 0.68
SCAND1-201ENST00000305978 TMOD2Q9NZR1 351 aa19.27■□□□□ 0.68
SCAND1-201ENST00000305978 MAST2Q6P0Q8 1798 aa19.27■□□□□ 0.67
SCAND1-201ENST00000305978 PDS5AQ29RF7 1337 aaKnown RBP19.26■□□□□ 0.67
SCAND1-201ENST00000305978 LDHBP07195 334 aaKnown RBP19.26■□□□□ 0.67
SCAND1-201ENST00000305978 G3BP1Q13283 466 aaKnown RBP eCLIP19.26■□□□□ 0.672e-7■■■■■ 35.7
SCAND1-201ENST00000305978 RASGRF1Q13972 1273 aa19.26■□□□□ 0.67
SCAND1-201ENST00000305978 POLA2Q14181 598 aa19.26■□□□□ 0.67
SCAND1-201ENST00000305978 MVPQ14764 893 aaKnown RBP19.26■□□□□ 0.67
SCAND1-201ENST00000305978 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
SCAND1-201ENST00000305978 C1orf115Q9H7X2 142 aa19.26■□□□□ 0.67
SCAND1-201ENST00000305978 DAGLAQ9Y4D2 1042 aa19.26■□□□□ 0.67
SCAND1-201ENST00000305978 CDK5RAP2Q96SN8 1893 aa19.25■□□□□ 0.67
SCAND1-201ENST00000305978 RPAP1Q9BWH6 1393 aaPredicted RBP19.25■□□□□ 0.67
SCAND1-201ENST00000305978 ZBTB7BO15156 539 aaPredicted RBP19.25■□□□□ 0.67
SCAND1-201ENST00000305978 ZBTB48P10074 688 aaPredicted RBP19.25■□□□□ 0.67
SCAND1-201ENST00000305978 SREBF2Q12772 1141 aa19.25■□□□□ 0.67
SCAND1-201ENST00000305978 FAM83AQ86UY5 434 aa19.25■□□□□ 0.67
SCAND1-201ENST00000305978 ANKRD13AQ8IZ07 590 aa19.25■□□□□ 0.67
SCAND1-201ENST00000305978 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
SCAND1-201ENST00000305978 WNK4Q96J92 1243 aa19.25■□□□□ 0.67
SCAND1-201ENST00000305978 ATP8B2P98198 1209 aa19.24■□□□□ 0.67
SCAND1-201ENST00000305978 ZGPATQ8N5A5 531 aaKnown RBP19.24■□□□□ 0.67
SCAND1-201ENST00000305978 ABHD8Q96I13 439 aa19.24■□□□□ 0.67
SCAND1-201ENST00000305978 NEUROD6Q96NK8 337 aa19.24■□□□□ 0.67
SCAND1-201ENST00000305978 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.24■□□□□ 0.67
SCAND1-201ENST00000305978 PANK1Q8TE04 598 aa19.23■□□□□ 0.67
SCAND1-201ENST00000305978 CDC42EP5Q6NZY7 148 aa19.22■□□□□ 0.67
SCAND1-201ENST00000305978 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms