RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MAP3K9P80192 1104 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NTRK3Q16288 839 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NBPF14Q5TI25 921 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NBPF10Q6P3W6 841 aaKnown RBP6.38□□□□□ -1.39
VPS50-202ENST00000305866 Q6ZUG5 572 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NBPF15Q8N660 670 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 CARD10Q9BWT7 1032 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 FAM160A1Q05DH4 1040 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 PDE4BQ07343 736 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 ANKRD13DQ6ZTN6 518 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 ZNF496Q96IT1 587 aaPredicted RBP6.38□□□□□ -1.39
VPS50-202ENST00000305866 MTA3Q9BTC8 594 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 FUT8Q9BYC5 575 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 TNMDQ9H2S6 317 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NDUFB9Q9Y6M9 179 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 A0A0U1RQJ8 604 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NUTM2FA1L443 756 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 RNF20Q5VTR2 975 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NUTM2GQ5VZR2 741 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 ADALQ6DHV7 355 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 VGLL2Q8N8G2 317 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 ATRIPQ8WXE1 791 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 SPATA32Q96LK8 384 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 GPHNQ9NQX3 736 aaPredicted RBP6.38□□□□□ -1.39
VPS50-202ENST00000305866 CLIC4Q9Y696 253 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 BCL9O00512 1426 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 M0R2C6 588 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 NEMFO60524 1076 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 RPS6KA5O75582 802 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 TATP17735 454 aaPredicted RBP6.37□□□□□ -1.39
VPS50-202ENST00000305866 SHC4Q6S5L8 630 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 ERCC4Q92889 916 aaPredicted RBP6.37□□□□□ -1.39
VPS50-202ENST00000305866 DENND2AQ9ULE3 1009 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 MAST3O60307 1309 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 H3BQF6 201 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 IKBKBO14920 756 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 USP5P45974 858 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 MCMDC2Q4G0Z9 681 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 CADPS2Q86UW7 1296 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 AACSQ86V21 672 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 TEX13AQ9BXU3 409 aaPredicted RBP6.37□□□□□ -1.39
VPS50-202ENST00000305866 XPO4Q9C0E2 1151 aaKnown RBP6.37□□□□□ -1.39
VPS50-202ENST00000305866 KIAA1468Q9P260 1216 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 MYH14Q7Z406 1995 aaKnown RBP6.37□□□□□ -1.39
VPS50-202ENST00000305866 TAF1LQ8IZX4 1826 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 SKILP12757 684 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 ST5P78524 1137 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 STX1AQ16623 288 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 ERCC6LQ2NKX8 1250 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 METTL16Q86W50 562 aaKnown RBP6.37□□□□□ -1.39
VPS50-202ENST00000305866 CREBRFQ8IUR6 639 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 XAGE3Q8WTP9 111 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 CCDC8Q9H0W5 538 aaPredicted RBP6.37□□□□□ -1.39
VPS50-202ENST00000305866 ANKZF1Q9H8Y5 726 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 LCMT1Q9UIC8 334 aa6.37□□□□□ -1.39
VPS50-202ENST00000305866 ATP1A3P13637 1013 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 ZKSCAN1P17029 563 aaPredicted RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 IL15P40933 162 aaPredicted RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 TC2NQ8N9U0 490 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 ARID3AQ99856 593 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 RAB21Q9UL25 225 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS50-202ENST00000305866 MRFAP1Q9Y605 127 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 CCDC88AQ3V6T2 1871 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 GREB1LQ9C091 1923 aaPredicted RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 TMEM232C9JQI7 657 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 E7EWF7 191 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 NOP2P46087 812 aaKnown RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 RCAN1P53805 252 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 G3BP1Q13283 466 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS50-202ENST00000305866 ALX1Q15699 326 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 CCAR1Q8IX12 1150 aaKnown RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 NEK1Q96PY6 1258 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 GJB4Q9NTQ9 266 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 C9orf78Q9NZ63 289 aaPredicted RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 FEZ2Q9UHY8 353 aaPredicted RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 PTPDC1A2A3K4 754 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 HSPD1P10809 573 aaKnown RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 TOB1P50616 345 aaPredicted RBP6.36□□□□□ -1.39
VPS50-202ENST00000305866 TFCP2Q12800 502 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 KRT222Q8N1A0 295 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 TIGD1Q96MW7 591 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 WDR24Q96S15 920 aa6.36□□□□□ -1.39
VPS50-202ENST00000305866 LY75O60449 1722 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 BLOC1S2Q6QNY1 142 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 COPS6Q7L5N1 327 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 VSTM4Q8IW00 320 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 DBNDD2Q9BQY9 259 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 PSD3Q9NYI0 1048 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 TCRBV5S4A2TA0A5A2 114 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 VPS37CA5D8V6 355 aaPredicted RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 CTAGE5O15320 804 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 SLU7O95391 586 aaKnown RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 ABL1P00519 1130 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 PCCAP05165 728 aaPredicted RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 ZFYP08048 801 aaPredicted RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 HNRNPH2P55795 449 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms