RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 CCDC42Q96M95 316 aa17.33■□□□□ 0.36
DDB1-201ENST00000301764 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.36
DDB1-201ENST00000301764 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
DDB1-201ENST00000301764 SNRPA1P09661 255 aaKnown RBP17.32■□□□□ 0.36
DDB1-201ENST00000301764 BRD3Q15059 726 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 KCNF1Q9H3M0 494 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 FANCLQ9NW38 375 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 MACROD2A1Z1Q3 448 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 CCDC144BQ3MJ40 725 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 GBP6Q6ZN66 633 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 CCDC43Q96MW1 224 aaKnown RBP17.32■□□□□ 0.36
DDB1-201ENST00000301764 GOLGA6CA6NDK9 693 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 GOLGA6DP0CG33 693 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 GOLGA6AQ9NYA3 693 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
DDB1-201ENST00000301764 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
DDB1-201ENST00000301764 IFT81Q8WYA0 676 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 TTF2Q9UNY4 1162 aaKnown RBP17.31■□□□□ 0.36
DDB1-201ENST00000301764 INPP5BP32019 993 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 USP27XA6NNY8 438 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 PPARDQ03181 441 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 RMND1Q9NWS8 449 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.31■□□□□ 0.36
DDB1-201ENST00000301764 MAPK8IP1Q9UQF2 711 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 GOLGA5Q8TBA6 731 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 PHKBQ93100 1093 aa17.31■□□□□ 0.36
DDB1-201ENST00000301764 STAT6P42226 847 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 KBTBD3Q8NAB2 608 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 MLKLQ8NB16 471 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 CCDC114Q96M63 670 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 MKRN1Q9UHC7 482 aaKnown RBP17.3■□□□□ 0.36
DDB1-201ENST00000301764 PSMA7O14818 248 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 KRT9P35527 623 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 IKQ13123 557 aaPredicted RBP17.3■□□□□ 0.36
DDB1-201ENST00000301764 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
DDB1-201ENST00000301764 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
DDB1-201ENST00000301764 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
DDB1-201ENST00000301764 VAV2P52735 878 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 HELLSQ9NRZ9 838 aa17.3■□□□□ 0.36
DDB1-201ENST00000301764 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
DDB1-201ENST00000301764 MMRN2Q9H8L6 949 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 TCP11L1Q9NUJ3 509 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 TCEAL9Q9UHQ7 104 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 SCRN1Q12765 414 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 TTC37Q6PGP7 1564 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 CCDC121Q6ZUS5 278 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 DDX21Q9NR30 783 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDB1-201ENST00000301764 RRP15Q9Y3B9 282 aaKnown RBP17.29■□□□□ 0.36
DDB1-201ENST00000301764 LONRF2Q1L5Z9 754 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 KRT40Q6A162 431 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 TRPM1Q7Z4N2 1603 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 ANKRD18BA2A2Z9 1011 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 E7EWF7 191 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 USP5P45974 858 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 GYS2P54840 703 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 CFAP58Q5T655 872 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 SCLT1Q96NL6 688 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 TSG101Q99816 390 aa17.29■□□□□ 0.36
DDB1-201ENST00000301764 CCDC40Q4G0X9 1142 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 TRMT112Q9UI30 125 aaKnown RBP17.28■□□□□ 0.36
DDB1-201ENST00000301764 NCOA3Q9Y6Q9 1424 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 B4E1Z4 1266 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 CUTAO60888 179 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 FGFR1OPO95684 399 aaKnown RBP17.28■□□□□ 0.36
DDB1-201ENST00000301764 FAM114A1Q8IWE2 563 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 RABGGTAQ92696 567 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 BMP15O95972 392 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 PYM1Q9BRP8 204 aaKnown RBP17.28■□□□□ 0.36
DDB1-201ENST00000301764 MYL10Q9BUA6 226 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 PFKFB2O60825 505 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 EZRP15311 586 aaKnown RBP17.28■□□□□ 0.36
DDB1-201ENST00000301764 TUBB2AQ13885 445 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 POSTNQ15063 836 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 ZKSCAN3Q9BRR0 538 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 TUBB2BQ9BVA1 445 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
DDB1-201ENST00000301764 ST7Q9NRC1 585 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 CLIC4Q9Y696 253 aa17.28■□□□□ 0.36
DDB1-201ENST00000301764 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
DDB1-201ENST00000301764 HOXC9P31274 260 aa17.27■□□□□ 0.36
DDB1-201ENST00000301764 IGHMBP2P38935 993 aaKnown RBP17.27■□□□□ 0.36
DDB1-201ENST00000301764 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
DDB1-201ENST00000301764 STAMQ92783 540 aa17.27■□□□□ 0.36
DDB1-201ENST00000301764 ARHGEF5Q12774 1597 aa17.27■□□□□ 0.36
DDB1-201ENST00000301764 GOLGA6BA6NDN3 693 aa17.27■□□□□ 0.36
DDB1-201ENST00000301764 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
DDB1-201ENST00000301764 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.36
DDB1-201ENST00000301764 VWA3AA6NCI4 1184 aa17.26■□□□□ 0.35
DDB1-201ENST00000301764 RBM6P78332 1123 aaKnown RBP17.26■□□□□ 0.35
DDB1-201ENST00000301764 SEPT7Q16181 437 aaKnown RBP17.26■□□□□ 0.35
DDB1-201ENST00000301764 EXOC1Q9NV70 894 aa17.26■□□□□ 0.35
DDB1-201ENST00000301764 RCOR1Q9UKL0 485 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms