RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ARMT1Q9H993 441 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 SPEF2Q9C093 1822 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 BCL9LQ86UU0 1499 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 KLF18A0A0U1RQI7 1052 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 TCRBV5S4A2TA0A5A2 114 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 PRKAB2O43741 272 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 UQCRFS1P1P0C7P4 283 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 GYG1P46976 350 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 ZSCAN25Q6NSZ9 544 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 MB21D2Q8IYB1 491 aaPredicted RBP25.73■■□□□ 1.71
TPM4-201ENST00000300933 MIGA1Q8NAN2 632 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 ZNF512BQ96KM6 892 aaPredicted RBP25.73■■□□□ 1.71
TPM4-201ENST00000300933 USP25Q9UHP3 1055 aa25.73■■□□□ 1.71
TPM4-201ENST00000300933 RESTQ13127 1097 aa25.72■■□□□ 1.71
TPM4-201ENST00000300933 SENP2Q9HC62 589 aa25.72■■□□□ 1.71
TPM4-201ENST00000300933 MBD4O95243 580 aa25.72■■□□□ 1.71
TPM4-201ENST00000300933 NCOA7Q8NI08 942 aa25.72■■□□□ 1.71
TPM4-201ENST00000300933 TTC12Q9H892 705 aaPredicted RBP25.72■■□□□ 1.71
TPM4-201ENST00000300933 ZNF652Q9Y2D9 606 aa25.72■■□□□ 1.71
TPM4-201ENST00000300933 LEO1Q8WVC0 666 aaPredicted RBP25.71■■□□□ 1.71
TPM4-201ENST00000300933 AK7Q96M32 723 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.71■■□□□ 1.71
TPM4-201ENST00000300933 UBE3CQ15386 1083 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 CYB5R4Q7L1T6 521 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 TICAM2Q86XR7 235 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 MYRIPQ8NFW9 859 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 STRBPQ96SI9 672 aaKnown RBP25.71■■□□□ 1.71
TPM4-201ENST00000300933 GOLGA8BA8MQT2 603 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 B4E1Z4 1266 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 FDPSP14324 419 aaKnown RBP25.71■■□□□ 1.71
TPM4-201ENST00000300933 CTDSPL2Q05D32 466 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 VPS72Q15906 364 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 CCDC94Q9BW85 323 aaPredicted RBP25.71■■□□□ 1.71
TPM4-201ENST00000300933 ABCF2Q9UG63 623 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 USP21Q9UK80 565 aa25.71■■□□□ 1.71
TPM4-201ENST00000300933 GOLGB1Q14789 3259 aaKnown RBP25.7■■□□□ 1.71
TPM4-201ENST00000300933 ABCC12Q96J65 1359 aa25.7■■□□□ 1.7
TPM4-201ENST00000300933 PHF14O94880 888 aa25.7■■□□□ 1.7
TPM4-201ENST00000300933 CCDC144CPQ8IYA2 1237 aa25.7■■□□□ 1.7
TPM4-201ENST00000300933 BCL2L12Q9HB09 334 aa25.7■■□□□ 1.7
TPM4-201ENST00000300933 GOLGA6L4A6NEF3 574 aa25.7■■□□□ 1.7
TPM4-201ENST00000300933 CELF1Q92879 486 aaKnown RBP25.7■■□□□ 1.7
TPM4-201ENST00000300933 ZNF274Q96GC6 653 aaPredicted RBP25.7■■□□□ 1.7
TPM4-201ENST00000300933 MYH7P12883 1935 aa25.69■■□□□ 1.7
TPM4-201ENST00000300933 GNPATO15228 680 aa25.69■■□□□ 1.7
TPM4-201ENST00000300933 SLC51AQ86UW1 340 aa25.69■■□□□ 1.7
TPM4-201ENST00000300933 PGBD1Q96JS3 809 aa25.69■■□□□ 1.7
TPM4-201ENST00000300933 EPB41L4AQ9HCS5 686 aaPredicted RBP25.69■■□□□ 1.7
TPM4-201ENST00000300933 HPS5Q9UPZ3 1129 aa25.69■■□□□ 1.7
TPM4-201ENST00000300933 MAP3K12Q12852 859 aa25.68■■□□□ 1.7
TPM4-201ENST00000300933 NOLC1Q14978 699 aaKnown RBP eCLIP25.68■■□□□ 1.7
TPM4-201ENST00000300933 LLPHQ9BRT6 129 aaKnown RBP25.68■■□□□ 1.7
TPM4-201ENST00000300933 LRP2BPQ9P2M1 347 aa25.68■■□□□ 1.7
TPM4-201ENST00000300933 CKAP2LQ8IYA6 745 aa25.68■■□□□ 1.7
TPM4-201ENST00000300933 PLCB2Q00722 1185 aa25.67■■□□□ 1.7
TPM4-201ENST00000300933 TRDNQ13061 729 aa25.67■■□□□ 1.7
TPM4-201ENST00000300933 DACT1Q9NYF0 836 aa25.67■■□□□ 1.7
TPM4-201ENST00000300933 ANKRD18AQ8IVF6 992 aa25.67■■□□□ 1.7
TPM4-201ENST00000300933 LCORLQ8N3X6 602 aa25.67■■□□□ 1.7
TPM4-201ENST00000300933 MYL10Q9BUA6 226 aa25.67■■□□□ 1.7
TPM4-201ENST00000300933 TACC3Q9Y6A5 838 aa25.67■■□□□ 1.7
TPM4-201ENST00000300933 DDX60Q8IY21 1712 aaKnown RBP25.66■■□□□ 1.7
TPM4-201ENST00000300933 SMIM22K7EJ46 135 aa25.66■■□□□ 1.7
TPM4-201ENST00000300933 ZNF710Q8N1W2 664 aa25.66■■□□□ 1.7
TPM4-201ENST00000300933 SCAND2PQ9GZW5 306 aaPredicted RBP25.66■■□□□ 1.7
TPM4-201ENST00000300933 NEDD4P46934 1319 aa25.66■■□□□ 1.7
TPM4-201ENST00000300933 ADCY5O95622 1261 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 KLRK1P26718 216 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 ADGRA1Q86SQ6 560 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 IFNL3Q8IZI9 196 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 PIBF1Q8WXW3 757 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 ADD1P35611 737 aaKnown RBP25.65■■□□□ 1.7
TPM4-201ENST00000300933 CBX1P83916 185 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 RRP12Q5JTH9 1297 aaKnown RBP25.65■■□□□ 1.7
TPM4-201ENST00000300933 CLEC4GQ6UXB4 293 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 BICD2Q8TD16 824 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 CDC5LQ99459 802 aaKnown RBP25.65■■□□□ 1.7
TPM4-201ENST00000300933 SALL1Q9NSC2 1324 aa25.65■■□□□ 1.7
TPM4-201ENST00000300933 CARMIL3Q8ND23 1372 aa25.64■■□□□ 1.7
TPM4-201ENST00000300933 NR1I2O75469 434 aa25.64■■□□□ 1.7
TPM4-201ENST00000300933 HMGN5P82970 282 aaKnown RBP25.64■■□□□ 1.7
TPM4-201ENST00000300933 AIFM3Q96NN9 605 aa25.64■■□□□ 1.7
TPM4-201ENST00000300933 NAPBQ9H115 298 aa25.64■■□□□ 1.7
TPM4-201ENST00000300933 TOMM22Q9NS69 142 aa25.64■■□□□ 1.7
TPM4-201ENST00000300933 CCNL1Q9UK58 526 aaPredicted RBP25.64■■□□□ 1.7
TPM4-201ENST00000300933 ZKSCAN3Q9BRR0 538 aa25.64■■□□□ 1.69
TPM4-201ENST00000300933 JAG2Q9Y219 1238 aa25.63■■□□□ 1.69
TPM4-201ENST00000300933 CPLX1O14810 134 aa25.63■■□□□ 1.69
TPM4-201ENST00000300933 POLR3DP05423 398 aaPredicted RBP25.63■■□□□ 1.69
TPM4-201ENST00000300933 ILDR1Q86SU0 546 aaPredicted RBP25.63■■□□□ 1.69
TPM4-201ENST00000300933 USP28Q96RU2 1077 aa25.63■■□□□ 1.69
TPM4-201ENST00000300933 MINPP1Q9UNW1 487 aa25.63■■□□□ 1.69
TPM4-201ENST00000300933 GSG1L2A8MUP6 293 aa25.62■■□□□ 1.69
TPM4-201ENST00000300933 PATL2C9JE40 543 aaKnown RBP25.62■■□□□ 1.69
TPM4-201ENST00000300933 MICU3Q86XE3 530 aa25.62■■□□□ 1.69
TPM4-201ENST00000300933 SLC4A4Q9Y6R1 1079 aa25.62■■□□□ 1.69
TPM4-201ENST00000300933 PDIA4P13667 645 aaKnown RBP25.62■■□□□ 1.69
TPM4-201ENST00000300933 NBPF5PQ86XG9 351 aaPredicted RBP25.62■■□□□ 1.69
TPM4-201ENST00000300933 SDR42E1Q8WUS8 393 aa25.62■■□□□ 1.69
TPM4-201ENST00000300933 RAI14Q9P0K7 980 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms