RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
SCN3B-201ENST00000299333 PRG4Q92954 1404 aaPredicted RBP16.67■□□□□ 0.26
SCN3B-201ENST00000299333 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
SCN3B-201ENST00000299333 TTF2Q9UNY4 1162 aaKnown RBP16.67■□□□□ 0.26
SCN3B-201ENST00000299333 TUBB2AQ13885 445 aa16.67■□□□□ 0.26
SCN3B-201ENST00000299333 PHLDB2Q86SQ0 1253 aa16.67■□□□□ 0.26
SCN3B-201ENST00000299333 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
SCN3B-201ENST00000299333 TUBB2BQ9BVA1 445 aa16.67■□□□□ 0.26
SCN3B-201ENST00000299333 DDX21Q9NR30 783 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCN3B-201ENST00000299333 UTP11Q9Y3A2 253 aaKnown RBP16.67■□□□□ 0.26
SCN3B-201ENST00000299333 SEC24BO95487 1268 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 DPH6Q7L8W6 267 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 LDHAL6AQ6ZMR3 332 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 CHST3Q7LGC8 479 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 PLIN2Q99541 437 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 MEIS3Q99687 375 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 MRFAP1Q9Y605 127 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 ZNF75DP51815 510 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 ZC4H2Q9NQZ6 224 aa16.66■□□□□ 0.26
SCN3B-201ENST00000299333 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 FAM13AO94988 1023 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 APOBRQ0VD83 1088 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 MAP7Q14244 749 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 LONRF3Q496Y0 759 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 GSDMBQ8TAX9 411 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 CTNND2Q9UQB3 1225 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 RUFY4Q6ZNE9 571 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 VPS16Q9H269 839 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 ZBTB3Q9H5J0 574 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 PRDM11Q9NQV5 511 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 PI4KAP2A4QPH2 592 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 ACTN4O43707 911 aaKnown RBP16.65■□□□□ 0.26
SCN3B-201ENST00000299333 CYP26C1Q6V0L0 522 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 GDAP1L1Q96MZ0 367 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 FRMD3A2A2Y4 597 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCN3B-201ENST00000299333 RUFY3Q7L099 469 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.65■□□□□ 0.26
SCN3B-201ENST00000299333 RIPOR2Q9Y4F9 1068 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 GPTP24298 496 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 PPFIA1Q13136 1202 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 MUM1Q2TAK8 710 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 UBE3BQ7Z3V4 1068 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 TRIM4Q9C037 500 aa16.65■□□□□ 0.26
SCN3B-201ENST00000299333 PCF11O94913 1555 aaKnown RBP16.65■□□□□ 0.26
SCN3B-201ENST00000299333 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
SCN3B-201ENST00000299333 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
SCN3B-201ENST00000299333 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
SCN3B-201ENST00000299333 PPANQ9NQ55 473 aaKnown RBP16.64■□□□□ 0.25
SCN3B-201ENST00000299333 LCA5Q86VQ0 697 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 ARHGAP24Q8N264 748 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 RLBP1P12271 317 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 PPP1R21Q6ZMI0 780 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 INTS4Q96HW7 963 aaKnown RBP16.64■□□□□ 0.25
SCN3B-201ENST00000299333 GEN1Q17RS7 908 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 TAOK1Q7L7X3 1001 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
SCN3B-201ENST00000299333 AKNAD1Q5T1N1 836 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 IMPG2Q9BZV3 1241 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 FAM83GA6ND36 823 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 LIG3P49916 1009 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 PRR16Q569H4 304 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 EPRSP07814 1512 aaKnown RBP16.63■□□□□ 0.25
SCN3B-201ENST00000299333 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 NAPAP54920 295 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 FANCCQ00597 558 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
SCN3B-201ENST00000299333 KLHL7Q8IXQ5 586 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 ESR2Q92731 530 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 NOC4LQ9BVI4 516 aaKnown RBP16.63■□□□□ 0.25
SCN3B-201ENST00000299333 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 PFDN4Q9NQP4 134 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 TACC3Q9Y6A5 838 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 CETN3O15182 167 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 PSMB7Q99436 277 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 TSPY3P0CV98 308 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 TSPY8P0CW00 308 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 STMN1P16949 149 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 CCDC14Q49A88 953 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 TMOD3Q9NYL9 352 aa16.63■□□□□ 0.25
SCN3B-201ENST00000299333 HHATQ5VTY9 493 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 NME9Q86XW9 330 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 CNNM2Q9H8M5 875 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 SPOPO43791 374 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 KRT2P35908 639 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 SNX16P57768 344 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 CCDC65Q8IXS2 484 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 SLC52A1Q9NWF4 448 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms