RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 RBM43Q6ZSC3 357 aaKnown RBP23.41■■□□□ 1.34
CXCL16-201ENST00000293778 CKAP2LQ8IYA6 745 aa23.41■■□□□ 1.34
CXCL16-201ENST00000293778 ZNF652Q9Y2D9 606 aa23.41■■□□□ 1.34
CXCL16-201ENST00000293778 LAMB2P55268 1798 aa23.4■■□□□ 1.34
CXCL16-201ENST00000293778 KCNQ2O43526 872 aa23.4■■□□□ 1.34
CXCL16-201ENST00000293778 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CXCL16-201ENST00000293778 USP28Q96RU2 1077 aa23.4■■□□□ 1.34
CXCL16-201ENST00000293778 FTOQ9C0B1 505 aaKnown RBP eCLIP23.4■■□□□ 1.34
CXCL16-201ENST00000293778 MRVI1Q9Y6F6 885 aa23.4■■□□□ 1.34
CXCL16-201ENST00000293778 CPLX1O14810 134 aa23.39■■□□□ 1.34
CXCL16-201ENST00000293778 RAB11FIP4Q86YS3 637 aa23.39■■□□□ 1.34
CXCL16-201ENST00000293778 DENND2AQ9ULE3 1009 aa23.39■■□□□ 1.34
CXCL16-201ENST00000293778 ALX1Q15699 326 aa23.39■■□□□ 1.33
CXCL16-201ENST00000293778 ILDR1Q86SU0 546 aaPredicted RBP23.39■■□□□ 1.33
CXCL16-201ENST00000293778 FAM200AQ8TCP9 573 aa23.39■■□□□ 1.33
CXCL16-201ENST00000293778 ORC3Q9UBD5 711 aaPredicted RBP23.39■■□□□ 1.33
CXCL16-201ENST00000293778 ANGEL1Q9UNK9 670 aaKnown RBP23.39■■□□□ 1.33
CXCL16-201ENST00000293778 DOCK2Q92608 1830 aa23.38■■□□□ 1.33
CXCL16-201ENST00000293778 CYB5R4Q7L1T6 521 aa23.38■■□□□ 1.33
CXCL16-201ENST00000293778 C8orf76Q96K31 380 aa23.38■■□□□ 1.33
CXCL16-201ENST00000293778 ZMYM6O95789 1325 aa23.37■■□□□ 1.33
CXCL16-201ENST00000293778 MBD4O95243 580 aa23.37■■□□□ 1.33
CXCL16-201ENST00000293778 BCAMP50895 628 aa23.37■■□□□ 1.33
CXCL16-201ENST00000293778 COL5A3P25940 1745 aaPredicted RBP23.37■■□□□ 1.33
CXCL16-201ENST00000293778 PATL2C9JE40 543 aaKnown RBP23.37■■□□□ 1.33
CXCL16-201ENST00000293778 CHRNDQ07001 517 aa23.37■■□□□ 1.33
CXCL16-201ENST00000293778 SH2B2O14492 632 aaPredicted RBP23.36■■□□□ 1.33
CXCL16-201ENST00000293778 PLCB2Q00722 1185 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 BCORQ6W2J9 1755 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 B4E1Z4 1266 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 OFD1O75665 1012 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 OTUD7BQ6GQQ9 843 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 CCAR1Q8IX12 1150 aaKnown RBP23.36■■□□□ 1.33
CXCL16-201ENST00000293778 IFNL3Q8IZI9 196 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 NKX2-3Q8TAU0 364 aa23.36■■□□□ 1.33
CXCL16-201ENST00000293778 CDC5LQ99459 802 aaKnown RBP23.36■■□□□ 1.33
CXCL16-201ENST00000293778 EPB41L4AQ9HCS5 686 aaPredicted RBP23.36■■□□□ 1.33
CXCL16-201ENST00000293778 PIP4K2BP78356 416 aa23.35■■□□□ 1.33
CXCL16-201ENST00000293778 FBXO18Q8NFZ0 1043 aa23.35■■□□□ 1.33
CXCL16-201ENST00000293778 NAPBQ9H115 298 aa23.35■■□□□ 1.33
CXCL16-201ENST00000293778 ARMT1Q9H993 441 aa23.35■■□□□ 1.33
CXCL16-201ENST00000293778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.35■■□□□ 1.33
CXCL16-201ENST00000293778 NEDD4P46934 1319 aa23.35■■□□□ 1.33
CXCL16-201ENST00000293778 SASS6Q6UVJ0 657 aa23.35■■□□□ 1.33
CXCL16-201ENST00000293778 TMEM87BQ96K49 555 aa23.35■■□□□ 1.33
CXCL16-201ENST00000293778 C4AP0C0L4 1744 aa23.34■■□□□ 1.33
CXCL16-201ENST00000293778 C4BP0C0L5 1744 aa23.34■■□□□ 1.33
CXCL16-201ENST00000293778 FAM98CQ17RN3 349 aaKnown RBP23.34■■□□□ 1.33
CXCL16-201ENST00000293778 ANO6Q4KMQ2 910 aa23.34■■□□□ 1.33
CXCL16-201ENST00000293778 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.34■■□□□ 1.33
CXCL16-201ENST00000293778 LINC00116Q8NCU8 138 aa23.34■■□□□ 1.33
CXCL16-201ENST00000293778 AP5Z1O43299 807 aa23.33■■□□□ 1.33
CXCL16-201ENST00000293778 METAP2P50579 478 aaKnown RBP eCLIP23.33■■□□□ 1.33
CXCL16-201ENST00000293778 ME1P48163 572 aa23.33■■□□□ 1.33
CXCL16-201ENST00000293778 CCDC73Q6ZRK6 1079 aa23.33■■□□□ 1.33
CXCL16-201ENST00000293778 RTEL1Q9NZ71 1219 aa23.33■■□□□ 1.33
CXCL16-201ENST00000293778 ZNF831Q5JPB2 1677 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 APOA5Q6Q788 366 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 GOLPH3LQ9H4A5 285 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 BCL9LQ86UU0 1499 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 GSG1L2A8MUP6 293 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 MPNDQ8N594 471 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 CBX8Q9HC52 389 aa23.32■■□□□ 1.32
CXCL16-201ENST00000293778 GNAT2P19087 354 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 CTDSPL2Q05D32 466 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
CXCL16-201ENST00000293778 BRAPQ7Z569 592 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 LUZP1Q86V48 1076 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 IGDCC4Q8TDY8 1250 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 LRP2BPQ9P2M1 347 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 COL4A1P02462 1669 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 PNPLA7Q6ZV29 1317 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 CTAGE5O15320 804 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 CDKL5O76039 1030 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 ANKRD18AQ8IVF6 992 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 LCORLQ8N3X6 602 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 NACAP1Q9BZK3 213 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 INCENPQ9NQS7 918 aa23.31■■□□□ 1.32
CXCL16-201ENST00000293778 POLR3DP05423 398 aaPredicted RBP23.3■■□□□ 1.32
CXCL16-201ENST00000293778 TMEM67Q5HYA8 995 aa23.3■■□□□ 1.32
CXCL16-201ENST00000293778 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
CXCL16-201ENST00000293778 RGS22Q8NE09 1264 aa23.3■■□□□ 1.32
CXCL16-201ENST00000293778 CNNM2Q9H8M5 875 aa23.3■■□□□ 1.32
CXCL16-201ENST00000293778 SENP2Q9HC62 589 aa23.3■■□□□ 1.32
CXCL16-201ENST00000293778 GJB4Q9NTQ9 266 aa23.3■■□□□ 1.32
CXCL16-201ENST00000293778 PRKAB2O43741 272 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 TOM1O60784 492 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 RXRAP19793 462 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 FAM160A1Q05DH4 1040 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 SF3B3Q15393 1217 aaKnown RBP23.29■■□□□ 1.32
CXCL16-201ENST00000293778 CPLX2Q6PUV4 134 aaKnown RBP23.29■■□□□ 1.32
CXCL16-201ENST00000293778 C3orf67Q6ZVT6 689 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 LY9Q9HBG7 655 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 SLC4A4Q9Y6R1 1079 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 ZBTB43O43298 467 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 TDO2P48775 406 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 KIAA2012Q0VF49 1180 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 SNW1Q13573 536 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms