RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 XAGE2Q96GT9 111 aa22.25■■□□□ 1.15
LSM12-201ENST00000293406 AKAP2Q9Y2D5 859 aa22.25■■□□□ 1.15
LSM12-201ENST00000293406 MORC2Q9Y6X9 1032 aaPredicted RBP22.25■■□□□ 1.15
LSM12-201ENST00000293406 KIF28PB7ZC32 967 aa22.25■■□□□ 1.15
LSM12-201ENST00000293406 ARMCX5Q6P1M9 558 aa22.25■■□□□ 1.15
LSM12-201ENST00000293406 PFKFB1P16118 471 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 CMA1P23946 247 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 ANTXR2P58335 489 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 KIF23Q02241 960 aaPredicted RBP22.24■■□□□ 1.15
LSM12-201ENST00000293406 DHX8Q14562 1220 aaKnown RBP22.24■■□□□ 1.15
LSM12-201ENST00000293406 KMT5BQ4FZB7 885 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 APPBP2Q92624 585 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 NUP188Q5SRE5 1749 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 NWD2Q9ULI1 1742 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 ZNF213O14771 459 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 NRDCO43847 1150 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 AXDND1Q5T1B0 1012 aaPredicted RBP22.24■■□□□ 1.15
LSM12-201ENST00000293406 PPP1R13BQ96KQ4 1090 aa22.24■■□□□ 1.15
LSM12-201ENST00000293406 NCAPHQ15003 741 aa22.23■■□□□ 1.15
LSM12-201ENST00000293406 ELF2Q15723 593 aa22.23■■□□□ 1.15
LSM12-201ENST00000293406 HSP90AB3PQ58FF7 597 aa22.23■■□□□ 1.15
LSM12-201ENST00000293406 PUS7LQ9H0K6 701 aaKnown RBP22.23■■□□□ 1.15
LSM12-201ENST00000293406 PSDA5PKW4 1024 aaPredicted RBP22.22■■□□□ 1.15
LSM12-201ENST00000293406 IGSF3O75054 1194 aa22.22■■□□□ 1.15
LSM12-201ENST00000293406 KCNJ6P48051 423 aa22.22■■□□□ 1.15
LSM12-201ENST00000293406 SCARF1Q14162 830 aa22.22■■□□□ 1.15
LSM12-201ENST00000293406 ZAP70P43403 619 aa22.22■■□□□ 1.15
LSM12-201ENST00000293406 GABPB1Q06547 395 aaPredicted RBP22.22■■□□□ 1.15
LSM12-201ENST00000293406 WDR19Q8NEZ3 1342 aa22.21■■□□□ 1.15
LSM12-201ENST00000293406 FBXO3Q9UK99 471 aa22.21■■□□□ 1.15
LSM12-201ENST00000293406 MROH7-TTC4A0A0A0MT08 1334 aa22.21■■□□□ 1.15
LSM12-201ENST00000293406 IKBKBO14920 756 aa22.2■■□□□ 1.15
LSM12-201ENST00000293406 GPAA1O43292 621 aa22.2■■□□□ 1.15
LSM12-201ENST00000293406 WDHD1O75717 1129 aaPredicted RBP22.2■■□□□ 1.15
LSM12-201ENST00000293406 LMOD1P29536 600 aaPredicted RBP22.2■■□□□ 1.15
LSM12-201ENST00000293406 MARCKSP29966 332 aaPredicted RBP22.2■■□□□ 1.15
LSM12-201ENST00000293406 SLC39A14Q15043 492 aa22.2■■□□□ 1.15
LSM12-201ENST00000293406 FBXO38Q6PIJ6 1188 aa22.2■■□□□ 1.15
LSM12-201ENST00000293406 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.14
LSM12-201ENST00000293406 FANCCQ00597 558 aa22.2■■□□□ 1.14
LSM12-201ENST00000293406 TIGD1Q96MW7 591 aa22.2■■□□□ 1.14
LSM12-201ENST00000293406 SYKP43405 635 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 ISM2Q6H9L7 571 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 SYT10Q6XYQ8 523 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 L2HGDHQ9H9P8 463 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 PARP4Q9UKK3 1724 aaKnown RBP22.19■■□□□ 1.14
LSM12-201ENST00000293406 ATF3P18847 181 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 TRDNQ13061 729 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 TAF7LQ5H9L4 462 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 KRT222Q8N1A0 295 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 CPDO75976 1380 aa22.19■■□□□ 1.14
LSM12-201ENST00000293406 RGS22Q8NE09 1264 aa22.18■■□□□ 1.14
LSM12-201ENST00000293406 CCDC85AQ96PX6 553 aaPredicted RBP22.18■■□□□ 1.14
LSM12-201ENST00000293406 ALG1Q9BT22 464 aa22.18■■□□□ 1.14
LSM12-201ENST00000293406 PI16Q6UXB8 463 aa22.18■■□□□ 1.14
LSM12-201ENST00000293406 ISCA1Q9BUE6 129 aa22.18■■□□□ 1.14
LSM12-201ENST00000293406 ABCC12Q96J65 1359 aa22.18■■□□□ 1.14
LSM12-201ENST00000293406 ZMYM6O95789 1325 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 PCDH11XQ9BZA7 1347 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 PCDH11YQ9BZA8 1340 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 TUBB4AP04350 444 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 ZNF771Q7L3S4 317 aaPredicted RBP22.17■■□□□ 1.14
LSM12-201ENST00000293406 VPS37DQ86XT2 251 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 AIFM3Q96NN9 605 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 TUBE1Q9UJT0 475 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 ANGEL1Q9UNK9 670 aaKnown RBP22.17■■□□□ 1.14
LSM12-201ENST00000293406 ERVV-2B6SEH9 535 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 ATP1A3P13637 1013 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 METAP2P50579 478 aaKnown RBP eCLIP22.17■■□□□ 1.14
LSM12-201ENST00000293406 JMYQ8N9B5 988 aa22.17■■□□□ 1.14
LSM12-201ENST00000293406 SYTL4Q96C24 671 aaPredicted RBP22.17■■□□□ 1.14
LSM12-201ENST00000293406 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.17■■□□□ 1.14
LSM12-201ENST00000293406 PPP6R2O75170 966 aa22.16■■□□□ 1.14
LSM12-201ENST00000293406 CDKL5O76039 1030 aa22.16■■□□□ 1.14
LSM12-201ENST00000293406 GNL2Q13823 731 aaKnown RBP22.16■■□□□ 1.14
LSM12-201ENST00000293406 ZCRB1Q8TBF4 217 aaKnown RBP22.16■■□□□ 1.14
LSM12-201ENST00000293406 HSD3B7Q9H2F3 369 aa22.16■■□□□ 1.14
LSM12-201ENST00000293406 DDX60Q8IY21 1712 aaKnown RBP22.16■■□□□ 1.14
LSM12-201ENST00000293406 NPHP1O15259 732 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 HPSEQ9Y251 543 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 KCPQ6ZWJ8 1503 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 CCP110O43303 1012 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 IFIT5Q13325 482 aaKnown RBP22.15■■□□□ 1.14
LSM12-201ENST00000293406 HOMER1Q86YM7 354 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 NBPF3Q9H094 633 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 C4AP0C0L4 1744 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 C4BP0C0L5 1744 aa22.15■■□□□ 1.14
LSM12-201ENST00000293406 CBFA2T2O43439 604 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 SERPINC1P01008 464 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 UBASH3AP57075 661 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 MYL5Q02045 173 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 CCDC93Q567U6 631 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 KRT40Q6A162 431 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 CPLX2Q6PUV4 134 aaKnown RBP22.14■■□□□ 1.14
LSM12-201ENST00000293406 SHC4Q6S5L8 630 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 TAOK2Q9UL54 1235 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 DENND2AQ9ULE3 1009 aa22.14■■□□□ 1.14
LSM12-201ENST00000293406 ERCC6LQ2NKX8 1250 aa22.14■■□□□ 1.13
LSM12-201ENST00000293406 FAM53CQ9NYF3 392 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms