RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 LUC7L2Q9Y383 392 aaKnown RBP17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 OAS2P29728 719 aaKnown RBP17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 LRMPQ12912 555 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 CCDC6Q16204 474 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 GBP6Q6ZN66 633 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 LINS1Q8NG48 757 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 RAD50Q92878 1312 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 ANO1Q5XXA6 986 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 FBF1Q8TES7 1133 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 POGZQ7Z3K3 1410 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 CALM1P0DP23 149 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 CALM2P0DP24 149 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 CALM3P0DP25 149 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 MYL10Q9BUA6 226 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 RASAL2Q9UJF2 1139 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 POLR2DO15514 142 aaKnown RBP17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 PLS1Q14651 629 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 CPLX4Q7Z7G2 160 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 LRRC27Q9C0I9 530 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 PLEKHA4Q9H4M7 779 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 SGSM2O43147 1006 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 ERCC3P19447 782 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 MTX1Q13505 466 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 NAPGQ99747 312 aaPredicted RBP17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 TTC21AQ8NDW8 1320 aa17.32■□□□□ 0.36
SHROOM4-201ENST00000289292 NPATQ14207 1427 aa17.31■□□□□ 0.36
SHROOM4-201ENST00000289292 MXRA7P84157 204 aa17.31■□□□□ 0.36
SHROOM4-201ENST00000289292 ACSBG1Q96GR2 724 aa17.31■□□□□ 0.36
SHROOM4-201ENST00000289292 PALD1Q9ULE6 856 aa17.31■□□□□ 0.36
SHROOM4-201ENST00000289292 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
SHROOM4-201ENST00000289292 ZFYVE9O95405 1425 aa17.31■□□□□ 0.36
SHROOM4-201ENST00000289292 TRMT44Q8IYL2 757 aaKnown RBP17.31■□□□□ 0.36
SHROOM4-201ENST00000289292 USP19O94966 1318 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 CNGA4Q8IV77 575 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 ANKS4BQ8N8V4 417 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 NAA25Q14CX7 972 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 ME3Q16798 604 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 PSMB7Q99436 277 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 KCNH3Q9ULD8 1083 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 RTL9Q8NET4 1388 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 NLRP12P59046 1061 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 GSTA5Q7RTV2 222 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 KCNK9Q9NPC2 374 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 AKNAD1Q5T1N1 836 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 PPP1R14CQ8TAE6 165 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 EHMT1Q9H9B1 1298 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 ZNF202O95125 648 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 PHKBQ93100 1093 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 GDAP1L1Q96MZ0 367 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
SHROOM4-201ENST00000289292 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 SYNRGQ9UMZ2 1314 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 PNOCQ13519 176 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 STXBP4Q6ZWJ1 553 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 TTC16Q8NEE8 873 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 IKBKGQ9Y6K9 419 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 EXOC5O00471 708 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 NR1I2O75469 434 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 BRD1O95696 1058 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 RAPGEF1Q13905 1077 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 CFAP58Q5T655 872 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 CCDC50Q8IVM0 306 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 SLF2Q8IX21 1173 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 MBD4O95243 580 aa17.29■□□□□ 0.36
SHROOM4-201ENST00000289292 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 IL13P35225 146 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 VAV2P52735 878 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 GABPB1Q06547 395 aaPredicted RBP17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 DCAF17Q5H9S7 520 aaPredicted RBP17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 DTHD1Q6ZMT9 781 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 DENND4BO75064 1496 aaPredicted RBP17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 STAMBPO95630 424 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 TNNI2P48788 182 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 FLT4P35916 1363 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 CCDC160A6NGH7 325 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 ADKP55263 362 aaKnown RBP17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 NOC4LQ9BVI4 516 aaKnown RBP17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 CD2BP2O95400 341 aaKnown RBP17.28■□□□□ 0.36
SHROOM4-201ENST00000289292 UTP14CQ5TAP6 766 aaKnown RBP17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 CCDC174Q6PII3 467 aa17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 JAKMIP2Q96AA8 810 aa17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 XPO4Q9C0E2 1151 aaKnown RBP17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 ARMT1Q9H993 441 aa17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 HGSO14964 777 aaPredicted RBP17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 C6orf163Q5TEZ5 329 aa17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 PIK3AP1Q6ZUJ8 805 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms