RNA–Protein interactions for RNA: ENST00000286628.13

KCNMA1-202, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-202ENST00000286628 CCDC42Q96M95 316 aa16.72■□□□□ 0.27
KCNMA1-202ENST00000286628 MRVI1Q9Y6F6 885 aa16.72■□□□□ 0.27
KCNMA1-202ENST00000286628 SPDYE4A6NLX3 237 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 STX17P56962 302 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 KIF5AQ12840 1032 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 DDX12PQ92771 950 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 NAP1L4Q99733 375 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 SH2D4AQ9H788 454 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 B4E1Z4 1266 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 XAGE2Q96GT9 111 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 TUBB4AP04350 444 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 RILPL1Q5EBL4 403 aa16.71■□□□□ 0.27
KCNMA1-202ENST00000286628 STAMBPO95630 424 aa16.71■□□□□ 0.26
KCNMA1-202ENST00000286628 COMMD10Q9Y6G5 202 aa16.71■□□□□ 0.26
KCNMA1-202ENST00000286628 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 KRT86O43790 486 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 CPA1P15085 419 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 IKBKGQ9Y6K9 419 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 XRCC6P12956 609 aaKnown RBP eCLIP16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 AOX1Q06278 1338 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 LMBR1Q8WVP7 490 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 PZPP20742 1482 aa16.7■□□□□ 0.26
KCNMA1-202ENST00000286628 CEP112Q8N8E3 955 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 ARID5AQ03989 594 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 NEK11Q8NG66 645 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 DYNC1I1O14576 645 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 CCDC129Q6ZRS4 1044 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 OTUD7AQ8TE49 926 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 ATP10AO60312 1499 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 RNF187Q5TA31 235 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 ANGEL1Q9UNK9 670 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 DEXIO95424 95 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 LMAN1P49257 510 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 USP19O94966 1318 aa16.69■□□□□ 0.26
KCNMA1-202ENST00000286628 SLC27A2O14975 620 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 GPAA1O43292 621 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 CCDC155Q8N6L0 562 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 WDR66Q8TBY9 1149 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 GGA1Q9UJY5 639 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 UBXN1Q04323 297 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 GCKRQ14397 625 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 ARMT1Q9H993 441 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 SEC24BO95487 1268 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 DNAJC10Q8IXB1 793 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 LPIN2Q92539 896 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 VWA3AA6NCI4 1184 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 HSF2BPO75031 334 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 ARFGAP3Q9NP61 516 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 BACH1O14867 736 aa16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 LLPHQ9BRT6 129 aaKnown RBP16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
KCNMA1-202ENST00000286628 RPL13P26373 211 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 CERS3Q8IU89 383 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 ELP1O95163 1332 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 ZNF496Q96IT1 587 aaPredicted RBP16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 SRRTQ9BXP5 876 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 ZKSCAN5Q9Y2L8 839 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 SGSM2O43147 1006 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 ZNF174Q15697 407 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 RGS22Q8NE09 1264 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 PLIN2Q99541 437 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 LUC7L2Q9Y383 392 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 SPECC1LQ69YQ0 1117 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 IFNKQ9P0W0 207 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 CTAGE9A4FU28 777 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 PLCD1P51178 756 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
KCNMA1-202ENST00000286628 A0A1B0GVL5 298 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 FAM160A1Q05DH4 1040 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 PPP1R2P41236 205 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 SV2BQ7L1I2 683 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 TSNARE1Q96NA8 513 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 STK32BQ9NY57 414 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 RASAL2Q9UJF2 1139 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 MAST3O60307 1309 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 ARHGEF10O15013 1369 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 MYL5Q02045 173 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
KCNMA1-202ENST00000286628 GRM1Q13255 1194 aa16.65■□□□□ 0.26
KCNMA1-202ENST00000286628 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
KCNMA1-202ENST00000286628 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
KCNMA1-202ENST00000286628 GIGYF2Q6Y7W6 1299 aaKnown RBP16.65■□□□□ 0.26
KCNMA1-202ENST00000286628 LRRC45Q96CN5 670 aa16.65■□□□□ 0.26
KCNMA1-202ENST00000286628 FAM212AQ96EL1 285 aa16.65■□□□□ 0.26
KCNMA1-202ENST00000286628 CCDC77Q9BR77 488 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms