RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
SEMA3D-201ENST00000284136 USP17L1Q7RTZ2 530 aa4.25□□□□□ -1.73
SEMA3D-201ENST00000284136 REM2Q8IYK8 340 aaPredicted RBP4.25□□□□□ -1.73
SEMA3D-201ENST00000284136 TRIM22Q8IYM9 498 aa4.25□□□□□ -1.73
SEMA3D-201ENST00000284136 TMCO5AQ8N6Q1 288 aa4.25□□□□□ -1.73
SEMA3D-201ENST00000284136 ZNRF3Q9ULT6 936 aa4.25□□□□□ -1.73
SEMA3D-201ENST00000284136 CFAP65Q6ZU64 1925 aaKnown RBP4.25□□□□□ -1.73
SEMA3D-201ENST00000284136 NDUFS2O75306 463 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 LMBR1LQ6UX01 489 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 HS2ST1Q7LGA3 356 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 KRT25Q7Z3Z0 450 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 SLC44A5Q8NCS7 719 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 CSGALNACT1Q8TDX6 532 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 THUMPD2Q9BTF0 503 aaKnown RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 RUBCNLQ9H714 662 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 RIPOR2Q9Y4F9 1068 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 RGS12O14924 1447 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 NCAM2O15394 837 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 FMR1Q06787 632 aaKnown RBP eCLIP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 ZSCAN1Q8NBB4 408 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 N4BP2L2Q92802 583 aaPredicted RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 POP1Q99575 1024 aaKnown RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 SCAF11Q99590 1463 aaKnown RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 GOLGA6CA6NDK9 693 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 GOLGA6BA6NDN3 693 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 BNIP3LO60238 219 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 KINO60870 393 aaKnown RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 GOLGA6DP0CG33 693 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 POTEIP0CG38 1075 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 POTEJP0CG39 1038 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 NUGGCQ68CJ6 796 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 ERC1Q8IUD2 1116 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 GOLGA6AQ9NYA3 693 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 ANKFY1Q9P2R3 1169 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 BICRAQ9NZM4 1560 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 SMIM22K7EJ46 135 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 PES1O00541 588 aaKnown RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 RRP8O43159 456 aaKnown RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 LDHCP07864 332 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 SMARCA1P28370 1054 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 DHPSP49366 369 aaPredicted RBP4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 GNASQ5JWF2 1037 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 TDHQ8IZJ6 230 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 GLG1Q92896 1179 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 PPP1R37O75864 691 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 RGS2P41220 211 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 ZNF827Q17R98 1081 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 SEPT14Q6ZU15 432 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 C16orf59Q7L2K0 433 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 HAUS6Q7Z4H7 955 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 USP40Q9NVE5 1235 aa4.24□□□□□ -1.73
SEMA3D-201ENST00000284136 CGNL1Q0VF96 1302 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 SPATA31A1Q5TZJ5 1347 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 H3BQ06 376 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 KYNUQ16719 465 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 TMC7Q7Z402 723 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 PLCH2O75038 1416 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 CALD1Q05682 793 aaKnown RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 NBPF12Q5TAG4 269 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 HDGFL1Q5TGJ6 251 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 NECAB3Q96P71 396 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 P2RX7Q99572 595 aaKnown RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 TCHPQ9BT92 498 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 PDZRN3Q9UPQ7 1066 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 KCPQ6ZWJ8 1503 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 SPATA31A5Q5VU36 1347 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 SPATA31A7Q8IWB4 1347 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 PSMD14O00487 310 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 INHAP05111 366 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 AMOTQ4VCS5 1084 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 SDE2Q6IQ49 451 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 CASC1Q6TDU7 716 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 CDCA5Q96FF9 252 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 LRIG1Q96JA1 1093 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 ARHGEF10LQ9HCE6 1279 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 CCDC141Q6ZP82 1450 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 RALGAPBQ86X10 1494 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 FBLN1P23142 703 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 MARCKSP29966 332 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 NLRP5P59047 1200 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 TRDNQ13061 729 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 EML3Q32P44 896 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 ZSCAN23Q3MJ62 389 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 LDHAL6AQ6ZMR3 332 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 ABCC2Q92887 1545 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 LRRC9Q6ZRR7 1453 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 ZC3H4Q9UPT8 1303 aaKnown RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 ANP32CO43423 234 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 LDHBP07195 334 aaKnown RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 XRCC6P12956 609 aaKnown RBP eCLIP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 AFMP43652 599 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 CACNB3P54284 484 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 PPIGQ13427 754 aaKnown RBP eCLIP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 CFAP100Q494V2 611 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 KIAA1211Q6ZU35 1233 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 ZNF513Q8N8E2 541 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 CA14Q9ULX7 337 aa4.23□□□□□ -1.73
SEMA3D-201ENST00000284136 DCDC2BA2VCK2 349 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms