RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 CIAO1O76071 339 aa16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 CTDNEP1O95476 244 aa16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 KLHL10Q6JEL2 608 aa16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 CCDC69A6NI79 296 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 GTF2F1P35269 517 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■□□ 16.9
LPCAT1-201ENST00000283415 ZAP70P43403 619 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 SPECC1Q5M775 1068 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 ATRNO75882 1429 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 SERPINC1P01008 464 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 IL2RBP14784 551 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 KBTBD3Q8NAB2 608 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 CHD4Q14839 1912 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 ANKRD18BA2A2Z9 1011 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
LPCAT1-201ENST00000283415 PRC1O43663 620 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
LPCAT1-201ENST00000283415 MNS1Q8NEH6 495 aa16■□□□□ 0.15
LPCAT1-201ENST00000283415 WDR17Q8IZU2 1322 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 hCG_1642624A0A1W2PR95 340 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 PTPN21Q16825 1174 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 DSCC1Q9BVC3 393 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 KCNF1Q9H3M0 494 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 MRVI1Q9Y6F6 885 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 PTPN14Q15678 1187 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 PGBD1Q96JS3 809 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 EXOC5O00471 708 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 PFKFB2O60825 505 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 LLPHQ9BRT6 129 aaKnown RBP15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 CTNNA3Q9UI47 895 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 RIC1Q4ADV7 1423 aa15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 SOS2Q07890 1332 aaPredicted RBP15.99■□□□□ 0.15
LPCAT1-201ENST00000283415 ABCC12Q96J65 1359 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 NR1I2O75469 434 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 XAGE2Q96GT9 111 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 DISP2A7MBM2 1401 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 A0A0G2JLW4 131 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 EYA2O00167 538 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 RANBP6O60518 1105 aaKnown RBP15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 PHKBQ93100 1093 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 SLC26A6Q9BXS9 759 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 DHX32Q7L7V1 743 aaKnown RBP15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 ISCA1Q9BUE6 129 aa15.98■□□□□ 0.15
LPCAT1-201ENST00000283415 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 B4E1Z4 1266 aa15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 TPM3P06753 285 aa15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 CEP57L1Q8IYX8 460 aa15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 COL16A1Q07092 1604 aaPredicted RBP15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 IRS4O14654 1257 aaPredicted RBP15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
LPCAT1-201ENST00000283415 SCRN1Q12765 414 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 AOPEPQ8N6M6 819 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 NEDD4P46934 1319 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 PCDH11XQ9BZA7 1347 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 PCDH11YQ9BZA8 1340 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 RNF113AO15541 343 aaKnown RBP15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 LMOD1P29536 600 aaPredicted RBP15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 TRIM28Q13263 835 aaKnown RBP15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 TMC6Q7Z403 805 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 CBX8Q9HC52 389 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 ZNF831Q5JPB2 1677 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 PRDM1O75626 825 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 SKILP12757 684 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 ITGA6P23229 1130 aa15.96■□□□□ 0.15
LPCAT1-201ENST00000283415 CFAP100Q494V2 611 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 ZSWIM4Q9H7M6 989 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 GOLGA8AA7E2F4 631 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 BCL2L12Q9HB09 334 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 INCENPQ9NQS7 918 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 CGNQ9P2M7 1197 aaKnown RBP15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 PLA2G4DQ86XP0 818 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 CLSTN2Q9H4D0 955 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
LPCAT1-201ENST00000283415 METAP2P50579 478 aaKnown RBP eCLIP15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 CPLX3Q8WVH0 158 aa15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 DDX19AQ9NUU7 478 aaKnown RBP15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 ROBO1Q9Y6N7 1651 aa15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 CSF1RP07333 972 aa15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 NAA30Q147X3 362 aaPredicted RBP15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 SART3Q15020 963 aaKnown RBP15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 NAA16Q6N069 864 aaPredicted RBP15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 DLEC1Q9Y238 1755 aa15.94■□□□□ 0.14
LPCAT1-201ENST00000283415 IGHMBP2P38935 993 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms