RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 E2F5Q15329 346 aa16.16■□□□□ 0.18
PTPRO-201ENST00000281171 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
PTPRO-201ENST00000281171 IBTKQ9P2D0 1353 aaPredicted RBP16.16■□□□□ 0.18
PTPRO-201ENST00000281171 KIF21AQ7Z4S6 1674 aa16.16■□□□□ 0.18
PTPRO-201ENST00000281171 ARHGAP24Q8N264 748 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 USP5P45974 858 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 MAP7D1Q3KQU3 841 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 EMILIN1Q9Y6C2 1016 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 NUP153P49790 1475 aaKnown RBP16.15■□□□□ 0.18
PTPRO-201ENST00000281171 PRAG1Q86YV5 1406 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 ZNF76P36508 570 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 COG7P83436 770 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
PTPRO-201ENST00000281171 LRRC27Q9C0I9 530 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 PDE11AQ9HCR9 933 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 PHLDB3Q6NSJ2 640 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 TMEM266Q2M3C6 531 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 TSG101Q99816 390 aa16.15■□□□□ 0.18
PTPRO-201ENST00000281171 TRPM2O94759 1503 aa16.14■□□□□ 0.18
PTPRO-201ENST00000281171 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 ZNF213O14771 459 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 BMP15O95972 392 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 GUCY2CP25092 1073 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 PSMC4P43686 418 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 NOP2P46087 812 aaKnown RBP16.14■□□□□ 0.17
PTPRO-201ENST00000281171 MTIF2P46199 727 aaKnown RBP16.14■□□□□ 0.17
PTPRO-201ENST00000281171 VSIG1Q86XK7 387 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 ZSCAN29Q8IWY8 852 aaPredicted RBP16.14■□□□□ 0.17
PTPRO-201ENST00000281171 TMEM63CQ9P1W3 806 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 ARHGAP6O43182 974 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 SYKP43405 635 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 PRPF4BQ13523 1007 aaKnown RBP16.14■□□□□ 0.17
PTPRO-201ENST00000281171 CCDC65Q8IXS2 484 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 KCNG4Q8TDN1 519 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 TRMT112Q9UI30 125 aaKnown RBP16.14■□□□□ 0.17
PTPRO-201ENST00000281171 ACEP12821 1306 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 HSP90AA5PQ58FG0 334 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 CROCCP2Q86T23 111 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 CTNNBL1Q8WYA6 563 aaPredicted RBP16.14■□□□□ 0.17
PTPRO-201ENST00000281171 KIAA0556O60303 1618 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
PTPRO-201ENST00000281171 POLE2P56282 527 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 GSTO1P78417 241 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 FAM204AQ9H8W3 233 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 MKNK2Q9HBH9 465 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 CBX8Q9HC52 389 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 BABAM1Q9NWV8 329 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 ANAPC4Q9UJX5 808 aa16.14■□□□□ 0.17
PTPRO-201ENST00000281171 CNGA4Q8IV77 575 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 ABTB1Q969K4 478 aaPredicted RBP16.13■□□□□ 0.17
PTPRO-201ENST00000281171 PIK3C2GO75747 1445 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 RIMS2Q9UQ26 1411 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 ATP5DP30049 168 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 RASSF2P50749 326 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 ACTR5Q9H9F9 607 aaPredicted RBP16.13■□□□□ 0.17
PTPRO-201ENST00000281171 TLDC2A0PJX2 215 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 IFT20Q8IY31 132 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 MORC2Q9Y6X9 1032 aaPredicted RBP16.13■□□□□ 0.17
PTPRO-201ENST00000281171 BAG3O95817 575 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 UBLCP1Q8WVY7 318 aaPredicted RBP16.13■□□□□ 0.17
PTPRO-201ENST00000281171 RPGRIP1Q96KN7 1286 aa16.13■□□□□ 0.17
PTPRO-201ENST00000281171 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
PTPRO-201ENST00000281171 TRIM27P14373 513 aa16.12■□□□□ 0.17
PTPRO-201ENST00000281171 RABGGTAQ92696 567 aa16.12■□□□□ 0.17
PTPRO-201ENST00000281171 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
PTPRO-201ENST00000281171 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
PTPRO-201ENST00000281171 CUL5Q93034 780 aa16.12■□□□□ 0.17
PTPRO-201ENST00000281171 NKIRAS1Q9NYS0 192 aa16.12■□□□□ 0.17
PTPRO-201ENST00000281171 MCUR1Q96AQ8 359 aa16.12■□□□□ 0.17
PTPRO-201ENST00000281171 AKR1B15C9JRZ8 316 aaPredicted RBP16.12■□□□□ 0.17
PTPRO-201ENST00000281171 CLTAP09496 248 aa16.12■□□□□ 0.17
PTPRO-201ENST00000281171 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
PTPRO-201ENST00000281171 GKAP1Q5VSY0 366 aaPredicted RBP16.12■□□□□ 0.17
PTPRO-201ENST00000281171 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
PTPRO-201ENST00000281171 ERBB4Q15303 1308 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 CATIPQ7Z7H3 387 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 TMTC2Q8N394 836 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 MORC4Q8TE76 937 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 DTNBP1Q96EV8 351 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 SLC12A7Q9Y666 1083 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 DISP3Q9P2K9 1392 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 PPP1R12AO14974 1030 aaPredicted RBP16.11■□□□□ 0.17
PTPRO-201ENST00000281171 PSMD2Q13200 908 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 RPGRQ92834 1020 aaKnown RBP16.11■□□□□ 0.17
PTPRO-201ENST00000281171 KCNK9Q9NPC2 374 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
PTPRO-201ENST00000281171 SND1Q7KZF4 910 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPRO-201ENST00000281171 TSGA10Q9BZW7 698 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 ABCF2Q9UG63 623 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 ETF1P62495 437 aaKnown RBP16.11■□□□□ 0.17
PTPRO-201ENST00000281171 SSRP1Q08945 709 aaKnown RBP16.11■□□□□ 0.17
PTPRO-201ENST00000281171 C8orf74Q6P047 294 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 CRACR2BQ8N4Y2 399 aaPredicted RBP16.11■□□□□ 0.17
PTPRO-201ENST00000281171 PPP1R14CQ8TAE6 165 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 THEGQ9P2T0 379 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 PCDHB15Q9Y5E8 787 aa16.11■□□□□ 0.17
PTPRO-201ENST00000281171 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms