RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 RSRP1Q9BUV0 290 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 C2orf49Q9BVC5 232 aaPredicted RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 LRPPRCP42704 1394 aaKnown RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 ESYT3A0FGR9 886 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 ABL1P00519 1130 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 TMF1P82094 1093 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 PDE3BQ13370 1112 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 MYBPC2Q14324 1141 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 XKR5Q6UX68 686 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 SP7Q8TDD2 431 aaPredicted RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 MRFAP1L1Q96HT8 127 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 EAF1Q96JC9 268 aaPredicted RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 DNAJC25Q9H1X3 360 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 ADAMTS1Q9UHI8 967 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 PNMA2Q9UL42 364 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 COMMD10Q9Y6G5 202 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 WDR90Q96KV7 1748 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 RFPL3O75679 317 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 C2orf27AQ580R0 203 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 JDP2Q8WYK2 163 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 CFAP53Q96M91 514 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 ZNF358Q9NW07 568 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 NUP155O75694 1391 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 STK10O94804 968 aaKnown RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 IBSPP21815 317 aaPredicted RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 HNRNPMP52272 730 aaKnown RBP eCLIP3.63□□□□□ -1.838e-8■■■■■ 31.1
HERC4-201ENST00000277817 GNL2Q13823 731 aaKnown RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 RASGRF1Q13972 1273 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 GALEQ14376 348 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 CCDC184Q52MB2 194 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 AMOTL1Q8IY63 956 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 GLIS3Q8NEA6 775 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 ANP32BQ92688 251 aaKnown RBP3.63□□□□□ -1.83
HERC4-201ENST00000277817 CYLDQ9NQC7 956 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 PRDM10Q9NQV6 1147 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 PCDH10Q9P2E7 1040 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 SWAP70Q9UH65 585 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 SCINQ9Y6U3 715 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 PAPPA2Q9BXP8 1791 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 NBPF26B4DH59 902 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 S100BP04271 92 aaPredicted RBP3.62□□□□□ -1.83
HERC4-201ENST00000277817 CASP7P55210 303 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 POU5F1BQ06416 359 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 ACBD5Q5T8D3 534 aaPredicted RBP3.62□□□□□ -1.83
HERC4-201ENST00000277817 ERAP2Q6P179 960 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 DEPDC7Q96QD5 511 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 EVA1BQ9NVM1 165 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 RIMS2Q9UQ26 1411 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 ITGB4P16144 1822 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 MMP16P51512 607 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 SAFB2Q14151 953 aaKnown RBP eCLIP3.62□□□□□ -1.832e-6■■■■□ 19.5
HERC4-201ENST00000277817 CTC1Q2NKJ3 1217 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 CCAR1Q8IX12 1150 aaKnown RBP3.62□□□□□ -1.83
HERC4-201ENST00000277817 NT5C1AQ9BXI3 368 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 ASPSCR1Q9BZE9 553 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 COPRSQ9NQ92 184 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 MAP10Q9P2G4 905 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 ZNF335Q9H4Z2 1342 aaPredicted RBP3.62□□□□□ -1.83
HERC4-201ENST00000277817 GIPC1O14908 333 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 TYRP1P17643 537 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 EPHB1P54762 984 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 ODR4Q5SWX8 454 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 FTSJ3Q8IY81 847 aaKnown RBP3.62□□□□□ -1.83
HERC4-201ENST00000277817 CEP63Q96MT8 703 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 FEZ1Q99689 392 aa3.62□□□□□ -1.83
HERC4-201ENST00000277817 OPLAHO14841 1288 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 POTEJP0CG39 1038 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 ATP6V1AP38606 617 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 COL9A2Q14055 689 aaPredicted RBP3.61□□□□□ -1.83
HERC4-201ENST00000277817 TCEAL8Q8IYN2 117 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 TSEN2Q8NCE0 465 aaKnown RBP3.61□□□□□ -1.83
HERC4-201ENST00000277817 ZNF594Q96JF6 807 aaPredicted RBP3.61□□□□□ -1.83
HERC4-201ENST00000277817 STRIP2Q9ULQ0 834 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 V9GY48 417 aaPredicted RBP3.61□□□□□ -1.83
HERC4-201ENST00000277817 STAT3P40763 770 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 BECN1Q14457 450 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 C3orf58Q8NDZ4 430 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 POGKQ9P215 609 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 CDV3Q9UKY7 258 aaKnown RBP3.61□□□□□ -1.83
HERC4-201ENST00000277817 CCDC189A1A4V9 331 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 RFPL1O75677 317 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 PSMD2Q13200 908 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 GGT6Q6P531 493 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 SYNPOQ8N3V7 929 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.61□□□□□ -1.83
HERC4-201ENST00000277817 NOC4LQ9BVI4 516 aaKnown RBP3.61□□□□□ -1.83
HERC4-201ENST00000277817 RCAN3Q9UKA8 241 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 TJP1Q07157 1748 aa3.61□□□□□ -1.83
HERC4-201ENST00000277817 ST20-MTHFSA0A0A6YYL1 179 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 A0A1W2PRU2 124 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 DXOO77932 396 aaKnown RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 INO80DQ53TQ3 878 aaPredicted RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 C4orf48Q5BLP8 95 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 RNF20Q5VTR2 975 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 TRMT44Q8IYL2 757 aaKnown RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 CELF2-AS1Q8N7Q2 184 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 RBBP8NLQ8NC74 664 aaPredicted RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 LRRC3Q9BY71 257 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 LGR6Q9HBX8 967 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 FANCLQ9NW38 375 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms