RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 A0A1W2PQ64 194 aa25.73■■□□□ 1.71
CDR2-201ENST00000268383 A0A1W2PQD8 194 aa25.73■■□□□ 1.71
CDR2-201ENST00000268383 ATP1A3P13637 1013 aa25.73■■□□□ 1.71
CDR2-201ENST00000268383 KIF23Q02241 960 aaPredicted RBP25.73■■□□□ 1.71
CDR2-201ENST00000268383 AXDND1Q5T1B0 1012 aaPredicted RBP25.73■■□□□ 1.71
CDR2-201ENST00000268383 LAMB4A4D0S4 1761 aa25.73■■□□□ 1.71
CDR2-201ENST00000268383 GPTP24298 496 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 ANO1Q5XXA6 986 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 POLR3EQ9NVU0 708 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 MCAMP43121 646 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 CYB5R4Q7L1T6 521 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 KCNG4Q8TDN1 519 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 APPBP2Q92624 585 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 MYL10Q9BUA6 226 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 NEMFO60524 1076 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 TBC1D10CQ8IV04 446 aa25.72■■□□□ 1.71
CDR2-201ENST00000268383 APPP05067 770 aa25.71■■□□□ 1.71
CDR2-201ENST00000268383 E4F1Q66K89 784 aaPredicted RBP25.71■■□□□ 1.71
CDR2-201ENST00000268383 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
CDR2-201ENST00000268383 ADAMTSL3P82987 1691 aa25.71■■□□□ 1.71
CDR2-201ENST00000268383 GOLGA8FQ08AF8 430 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 GOLGA8DPQ0D2H9 430 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 NCAPHQ15003 741 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 LRRN4CLQ8ND94 238 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 CLIC6Q96NY7 704 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 ISCA1Q9BUE6 129 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 KAT6BQ8WYB5 2073 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 YEATS4O95619 227 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 TCIRG1Q13488 830 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 ELF2Q15723 593 aa25.7■■□□□ 1.7
CDR2-201ENST00000268383 CDC27P30260 824 aa25.69■■□□□ 1.7
CDR2-201ENST00000268383 MICU3Q86XE3 530 aa25.69■■□□□ 1.7
CDR2-201ENST00000268383 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
CDR2-201ENST00000268383 METTL24Q5JXM2 366 aa25.69■■□□□ 1.7
CDR2-201ENST00000268383 SLC9C2Q5TAH2 1124 aa25.69■■□□□ 1.7
CDR2-201ENST00000268383 PCDH11XQ9BZA7 1347 aa25.69■■□□□ 1.7
CDR2-201ENST00000268383 PCDH11YQ9BZA8 1340 aa25.69■■□□□ 1.7
CDR2-201ENST00000268383 DHX16O60231 1041 aaKnown RBP25.68■■□□□ 1.7
CDR2-201ENST00000268383 IDH1O75874 414 aaKnown RBP25.68■■□□□ 1.7
CDR2-201ENST00000268383 IFIT5Q13325 482 aaKnown RBP25.68■■□□□ 1.7
CDR2-201ENST00000268383 HSP90AA4PQ58FG1 418 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 FBXL16Q8N461 479 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 ALG1Q9BT22 464 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 STRN4Q9NRL3 753 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 ATG3Q9NT62 314 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 AKAP2Q9Y2D5 859 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 MYO5AQ9Y4I1 1855 aaKnown RBP25.68■■□□□ 1.7
CDR2-201ENST00000268383 B4E1Z4 1266 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 KMT5BQ4FZB7 885 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.68■■□□□ 1.7
CDR2-201ENST00000268383 DPF2Q92785 391 aa25.68■■□□□ 1.7
CDR2-201ENST00000268383 NLRP12P59046 1061 aa25.67■■□□□ 1.7
CDR2-201ENST00000268383 PNOCQ13519 176 aa25.67■■□□□ 1.7
CDR2-201ENST00000268383 OSBPL5Q9H0X9 879 aaPredicted RBP25.67■■□□□ 1.7
CDR2-201ENST00000268383 KCPQ6ZWJ8 1503 aa25.67■■□□□ 1.7
CDR2-201ENST00000268383 SPECC1Q5M775 1068 aa25.67■■□□□ 1.7
CDR2-201ENST00000268383 VPS37DQ86XT2 251 aa25.67■■□□□ 1.7
CDR2-201ENST00000268383 STK11IPQ8N1F8 1099 aa25.67■■□□□ 1.7
CDR2-201ENST00000268383 GREM2Q9H772 168 aa25.67■■□□□ 1.7
CDR2-201ENST00000268383 ZFYP08048 801 aaPredicted RBP25.66■■□□□ 1.7
CDR2-201ENST00000268383 SYT10Q6XYQ8 523 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 BRAPQ7Z569 592 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 DNAJC10Q8IXB1 793 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 PIH1D3Q9NQM4 214 aaKnown RBP25.66■■□□□ 1.7
CDR2-201ENST00000268383 TNS3Q68CZ2 1445 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 HLFQ16534 295 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 LDHAL6AQ6ZMR3 332 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 PPP1R13BQ96KQ4 1090 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 HSD3B7Q9H2F3 369 aa25.66■■□□□ 1.7
CDR2-201ENST00000268383 METAP2P50579 478 aaKnown RBP eCLIP25.65■■□□□ 1.7
CDR2-201ENST00000268383 SYCP1Q15431 976 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 KRT40Q6A162 431 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 SHC4Q6S5L8 630 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 KIF18AQ8NI77 898 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 CGNQ9P2M7 1197 aaKnown RBP25.65■■□□□ 1.7
CDR2-201ENST00000268383 SPATA31A3Q5VYP0 1347 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 ERVV-2B6SEH9 535 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 GSDMDP57764 484 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 HELBQ8NG08 1087 aaPredicted RBP25.65■■□□□ 1.7
CDR2-201ENST00000268383 ASAP1Q9ULH1 1129 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 SNAP23O00161 211 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 SFPQP23246 707 aaKnown RBP eCLIP25.65■■□□□ 1.7
CDR2-201ENST00000268383 CMA1P23946 247 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 SYKP43405 635 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 FANCCQ00597 558 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 OGFRQ9NZT2 677 aa25.65■■□□□ 1.7
CDR2-201ENST00000268383 GNL2Q13823 731 aaKnown RBP25.64■■□□□ 1.7
CDR2-201ENST00000268383 ITGA6P23229 1130 aa25.64■■□□□ 1.69
CDR2-201ENST00000268383 TRDNQ13061 729 aa25.64■■□□□ 1.69
CDR2-201ENST00000268383 SLC39A14Q15043 492 aa25.64■■□□□ 1.69
CDR2-201ENST00000268383 LRRFIP1Q32MZ4 808 aaKnown RBP25.64■■□□□ 1.69
CDR2-201ENST00000268383 UTP14CQ5TAP6 766 aaKnown RBP25.64■■□□□ 1.69
CDR2-201ENST00000268383 FBXO38Q6PIJ6 1188 aa25.64■■□□□ 1.69
CDR2-201ENST00000268383 ANGEL1Q9UNK9 670 aaKnown RBP25.64■■□□□ 1.69
CDR2-201ENST00000268383 FEZ1Q99689 392 aa25.63■■□□□ 1.69
CDR2-201ENST00000268383 DDX41Q9UJV9 622 aaKnown RBP25.63■■□□□ 1.69
CDR2-201ENST00000268383 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
CDR2-201ENST00000268383 FOXN1O15353 648 aa25.63■■□□□ 1.69
CDR2-201ENST00000268383 ADD2P35612 726 aa25.63■■□□□ 1.69
CDR2-201ENST00000268383 CNNM1Q9NRU3 951 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms