RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 MIGA1Q8NAN2 632 aa19.51■□□□□ 0.71
SRF-201ENST00000265354 NSUN7Q8NE18 718 aaKnown RBP19.51■□□□□ 0.71
SRF-201ENST00000265354 ZNF496Q96IT1 587 aaPredicted RBP19.51■□□□□ 0.71
SRF-201ENST00000265354 BCCIPQ9P287 314 aaKnown RBP eCLIP19.51■□□□□ 0.71
SRF-201ENST00000265354 MFSD6Q6ZSS7 791 aa19.5■□□□□ 0.71
SRF-201ENST00000265354 CEP131Q9UPN4 1083 aa19.5■□□□□ 0.71
SRF-201ENST00000265354 ELP1O95163 1332 aa19.5■□□□□ 0.71
SRF-201ENST00000265354 KRT40Q6A162 431 aa19.5■□□□□ 0.71
SRF-201ENST00000265354 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
SRF-201ENST00000265354 ZNF790Q6PG37 636 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 GOLPH3LQ9H4A5 285 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 IL15P40933 162 aaPredicted RBP19.49■□□□□ 0.71
SRF-201ENST00000265354 CDR1P51861 262 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 NLRP5P59047 1200 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 RESTQ13127 1097 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 MADDQ8WXG6 1647 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 GCP02774 474 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 HSPD1P10809 573 aaKnown RBP19.49■□□□□ 0.71
SRF-201ENST00000265354 TRIM21P19474 475 aaKnown RBP19.49■□□□□ 0.71
SRF-201ENST00000265354 SPA17Q15506 151 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 CDK5RAP3Q96JB5 506 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 IMPACTQ9P2X3 320 aa19.49■□□□□ 0.71
SRF-201ENST00000265354 MYOM2P54296 1465 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 ZEB2O60315 1214 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 BRAPQ7Z569 592 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 LLPHQ9BRT6 129 aaKnown RBP19.48■□□□□ 0.71
SRF-201ENST00000265354 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 AKR1B15C9JRZ8 316 aaPredicted RBP19.48■□□□□ 0.71
SRF-201ENST00000265354 ARHGAP6O43182 974 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 PPP2R2CQ9Y2T4 447 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 BICDL1Q6ZP65 573 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 KRI1Q8N9T8 703 aaKnown RBP19.48■□□□□ 0.71
SRF-201ENST00000265354 ATP10DQ9P241 1426 aa19.48■□□□□ 0.71
SRF-201ENST00000265354 SHTN1A0MZ66 631 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 A1BGP04217 495 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 MAP3K12Q12852 859 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 WTAPQ15007 396 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 TDRD12Q587J7 1177 aaKnown RBP19.47■□□□□ 0.71
SRF-201ENST00000265354 MYO1BO43795 1136 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 PNMA6AP0CW24 399 aaPredicted RBP19.47■□□□□ 0.71
SRF-201ENST00000265354 MTIF2P46199 727 aaKnown RBP19.47■□□□□ 0.71
SRF-201ENST00000265354 GRAMD1CQ8IYS0 662 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 SLF1Q9BQI6 1058 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 RCOR1Q9UKL0 485 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 SBNO1A3KN83 1393 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 PFKFB2O60825 505 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 ATP5JP18859 108 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 BRD2P25440 801 aaKnown RBP19.47■□□□□ 0.71
SRF-201ENST00000265354 RTN1Q16799 776 aa19.47■□□□□ 0.71
SRF-201ENST00000265354 NEURL1BA8MQ27 555 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 GPAA1O43292 621 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 MAP9Q49MG5 647 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 IQSEC2Q5JU85 1478 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 CLGNO14967 610 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 IDEP14735 1019 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 SF3A3Q12874 501 aaKnown RBP eCLIP19.46■□□□□ 0.71
SRF-201ENST00000265354 ZNF174Q15697 407 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 PLA2G4DQ86XP0 818 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 NUTM2AQ8IVF1 878 aaPredicted RBP19.46■□□□□ 0.71
SRF-201ENST00000265354 DIS3L2Q8IYB7 885 aaKnown RBP19.46■□□□□ 0.71
SRF-201ENST00000265354 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 VWA3AA6NCI4 1184 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 TTC31Q49AM3 519 aaPredicted RBP19.46■□□□□ 0.71
SRF-201ENST00000265354 LRRC24Q50LG9 513 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 TRIM47Q96LD4 638 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 PDE11AQ9HCR9 933 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 LRRC7Q96NW7 1537 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 MACROD2A1Z1Q3 448 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 ATP2B2Q01814 1243 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 POLA2Q14181 598 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 CEP89Q96ST8 783 aa19.46■□□□□ 0.71
SRF-201ENST00000265354 PNPLA6Q8IY17 1366 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 PLXNC1O60486 1568 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 ZAP70P43403 619 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 HLTFQ14527 1009 aaKnown RBP eCLIP19.45■□□□□ 0.7
SRF-201ENST00000265354 PI16Q6UXB8 463 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 IP6K1Q92551 441 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 METTL22Q9BUU2 404 aaPredicted RBP19.45■□□□□ 0.7
SRF-201ENST00000265354 SERTAD1Q9UHV2 236 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 FAM170AA1A519 330 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 UBXN1Q04323 297 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 TAX1BP1Q86VP1 789 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 GOLGA6L10A6NI86 522 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 PRDM1O75626 825 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 ZMYND10O75800 440 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 EPHA10Q5JZY3 1008 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 HDXQ7Z353 690 aa19.45■□□□□ 0.7
SRF-201ENST00000265354 RNASE9P60153 205 aaKnown RBP19.44■□□□□ 0.7
SRF-201ENST00000265354 CEP112Q8N8E3 955 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 FGAP02671 866 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 LTKP29376 864 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 UHRF1BP1LA0JNW5 1464 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 BTBD18B2RXH4 712 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 CCDC96Q2M329 555 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 FBXO18Q8NFZ0 1043 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
SRF-201ENST00000265354 VAT1LQ9HCJ6 419 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms